Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2809 |
Symbol | |
ID | 5831630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3145131 |
End bp | 3147284 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641368611 |
Product | TPR repeat-containing protein |
Protein accession | YP_001640271 |
Protein GI | 163852228 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAAC ATCGCAAATC GCGGACGATC GAGCACGCTC AAGCCGCGGA TTCGGTCGAG CGCACTCTCG CCAAGGCCAT CGCCCACCGT ACCGCCGGAC GTTATGACAA AGCCCGCCGC AACCTTCAGC GCGCGCTGGA CGCGGCGCCG CATCACGCGG GCACGCACCA CGAACTCGGC CTCCTCACCA GCAAAGCGGA CGGACCCGGA CCGGCGGTCC CGCACTTCGT CGCCGCCCTG AGGGCTGAGC CCGAGCAGCC GCGCTATTGG CTCGCTTTGG CCGTGACGCT CCTCGTGCTG AACCGGCTCG ACGAGGCGCG TGCGCTGATG GTGCAATTCC GCAGCCGGGA CATCGCCGAC GATGCATCGC GCGCGATCCT CAAGGATTTC GCCGACCATG CCTTCGCGCG GGGACAGGAG CGCTACAGCG CGGGCGACCT CGCCGCCGCG GAGACCCTGG CCGACCTCGT CATCGGCCTG GACGAAACCC ACGCCAACGC GACCCATCTC GCGGGCGCCA TCGCCGCGGG GAAGGGCCGA AACCAGCAGG CGTTCGACCT GTTCAGCATC GCGATCTACC GCGAGCCCGA CAACGCCGGC TATTTCAGCA GCCTCGGCGC CGTCCTGATC GCGATGGGCG ACTACACTGG CGCCGTTTCG GCTCTGGAGC GGGCAGTCGC CCTTAATCCC AACCTCGCGA TCGCGCATTC GAACCTGTCC GGTGTCTATC AGCGCGTCAG CCATCACAGC GCGGCCGTGA CTCATGCGCG GCGTGCCGTC GCGCTCGATG CCGGCCTCTC CAATGCGCAC AACAATCTCG GTTGCAGCCT GAAGAGTCTC GGCCACTTGC CCGAGGCGCT CGCGAGTTTC GACAGGGCGC TCGCGACCGA TCCGACGCAC ATCACCGCCC ATTCCAACCG GCTGTTCACC AAGCTCTATG CCGAGGGCGT TCCGCATGCC GACTACGCGG CCGACGCGCG CAGCTTCGGC GCACGCTTCG CCGACCCGCT GCTGCGCAGG CGCCCCTTCG CCAACGATCG TGATCCCGAA CGCCGTCTAC GAATCGGATT CGTTTCGGGC GACCTCTGCA CCCACGCCGT CGCCCGCTTC ATCGAGCCAT TCCTGCGCCA CCTGGATCGG ACGCAGTTCG AGGCGCGCGC CTACATGACC CAGGCAGCGG AAGACGCGGT TTCGGCCCGC CTGCGGACTC TGTTCGATGG TTGGCACAAC ATCACCGGCC TCGACGACGA CGAGGCCGCC GACCTCATCG AGTCGGAGAA GATCGACATC CTCGTCGATC TGTCCGGCCA CAGCGCCGGC CACCGGCTGC TCGTTTTCGC CCGCAAGCCG GCGCCGGTTC AGGTCACGTG GATGGGCCAC CCGGCGACCA CCGGCCTGCG CGCCATGGAT TACCGCCTGA CCGATGCCCG CCTCGATGTG CCCGGCCAAA CGGAGAGCCT GCACACGGAG ACGGTGTGGT GGATGCCGGG CGTCTCCGCC ACCTACGAGG CGCATCACGA CATTCCGCCC GTGCGCGAGC GACCGCCCTT CGAAGACAAC GGCTTCGTCA CCTTCGGTGT CATGAACCGG TTCGAGAAAA TCAGCGACGG CGCCTTCAAG ACCTGGGCCG CCATCCTGGA AGCGCTTCCC AACGCGCGTC TGTTCATGGT CGTGGCCGAT GTAGAGACGG CCGTCATTCG GGAACAGGTC AATGCACGCC TGTCGATGGC CGGGATTCCG CAAGACCGGG TGCGGCTGCA TCCCCGCGTC ACGACGACAT ATTTCGACCT CTACCACGAG TTCGACATCG CCCTCGATTC GTTTCCCTAC AATGGTGGGA CGACGAGTTG CGACACGCTG TGCATGGGCG TCCCCTTCAT CGCGCTGCGG GGCAGCCAGG CGGTGTCGCG GGTCGGTTCA TCGCTGCTGG AGGCGATCGG ACTGGAAGAA CTCGTGGGCG ACACGCCTGA GGATTACGCG ACCCGCGCGC TGGAACTGGC GCGCGATCCG GATCGCCTCC GCGCCATCCG CACGAACCTG CGCGAGCGCA TGTTCGCCGG TCCGGTCATG GACCATGCGC GCTTCGCGAG GGACATGGGC GACGCGTTCC GCTCCATGTG GAAAGGCTGG CTCGAGACGC ATCACTCCGT GTGA
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Protein sequence | MREHRKSRTI EHAQAADSVE RTLAKAIAHR TAGRYDKARR NLQRALDAAP HHAGTHHELG LLTSKADGPG PAVPHFVAAL RAEPEQPRYW LALAVTLLVL NRLDEARALM VQFRSRDIAD DASRAILKDF ADHAFARGQE RYSAGDLAAA ETLADLVIGL DETHANATHL AGAIAAGKGR NQQAFDLFSI AIYREPDNAG YFSSLGAVLI AMGDYTGAVS ALERAVALNP NLAIAHSNLS GVYQRVSHHS AAVTHARRAV ALDAGLSNAH NNLGCSLKSL GHLPEALASF DRALATDPTH ITAHSNRLFT KLYAEGVPHA DYAADARSFG ARFADPLLRR RPFANDRDPE RRLRIGFVSG DLCTHAVARF IEPFLRHLDR TQFEARAYMT QAAEDAVSAR LRTLFDGWHN ITGLDDDEAA DLIESEKIDI LVDLSGHSAG HRLLVFARKP APVQVTWMGH PATTGLRAMD YRLTDARLDV PGQTESLHTE TVWWMPGVSA TYEAHHDIPP VRERPPFEDN GFVTFGVMNR FEKISDGAFK TWAAILEALP NARLFMVVAD VETAVIREQV NARLSMAGIP QDRVRLHPRV TTTYFDLYHE FDIALDSFPY NGGTTSCDTL CMGVPFIALR GSQAVSRVGS SLLEAIGLEE LVGDTPEDYA TRALELARDP DRLRAIRTNL RERMFAGPVM DHARFARDMG DAFRSMWKGW LETHHSV
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