Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2739 |
Symbol | |
ID | 5831537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3068384 |
End bp | 3070132 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641368539 |
Product | type I secretion system ATPase |
Protein accession | YP_001640201 |
Protein GI | 163852158 |
COG category | [R] General function prediction only |
COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAACG TTAGGCACGA AAAGAACGAG ATCGCCGCCG CTTTGGCGCG ATGCAAGACG GCCTTCATCG GCGTGGCCGT GATGAGCGGG CTGGTGAACA TTCTCTATCT CACCGGTTCG TTCTTCATGC TCGAGGTCTA CGACCGGGTG ATCCCGAGCC GTTCGGTACC GACCCTGATC GGCCTCGCGG CCCTCGCCCT CGTGCTCTAC GCGTTCCAGG GCGTGCTCGA AGCCCTCCGC GGCCGGATCC TCGCCCGTGT CGGCGCTGCC CTCGACGAGG CCTTGAGCGG GCGGGTGTTC GATCTCGTGG TGCGTGCGCC GCTCAAAGGC ACGACCCAGG GCGATGGCCT TCTGCCCCTG CGCGACCTCG ATCAGCTCCG CGCGTTCCTG TCCGGTTCCG GTCCTTCCGC CTTTTTCGAT CTGCCCTGGA TGCCGGTCTA TTTGCTGATC TGCTTCCTGT TTCACCCGCT GATCGGTGTC GCCGCCCTCG TCGGCATGGG CATTCTCGCC GCCCTGACCT TCATGACCGA CCGCGCCAGC AAGGGTCCGA CGCGGGCTGC GACCGGCCAC GGCATGCGCC GCAACGGTCT GGCCGAAGCC GGCCGCCGCA ACGCCGAGGT GCTGGCCGCG ATGGGCATGC AGGAGCGGCT CGCCGCTCGC TGGGCCGGGG CCAACCGCGA ATACATGGAG GCGCATCAGG CCGTGTCGGA TGCCGGCAGC GGCTACGGTG CCGGTTCCAA GGTGTTCCGC ATGGCCCTGC AATCGGGCGT GCTCGCGCTC GGCGCCTGGC TCGTCATCCA TAACGAGGCC AGCGCCGGCG TCATCATCGC GAGCTCGATC CTCGTCTCCC GTGCGCTCGC GCCCGCGGAA CTCACCATCG CCAACTGGAA GGGCTTCGTC GCCGCGCGGC AAAGCTGGCA TCGGCTGTCG GAGCTGCTGG CCCGGCTGCC TCAGACCGAG CGTCCGCACG CGCTGCCGGC GCCGAGCGAG ACCATCTCCG TCGAGGGTGC CAGCATCGCC CCCCCCGGCA CGCCGCGGCT CGTGGTGCAG GATGTGAGCT TCGGCCTCAG AGCGGGGCAG GGGCTCGGCA TCATCGGCCC CTCGGCCTCC GGCAAGTCTT CCCTCGTGCG AGCCCTTGTC GGCGTCTGGC CGCCGATCCG CGGAAAGGTC CGGTTCGACG GTGCCGCCCT GGATCAATGG ACGAGCGGCG ACCTCGGCCC GCATATCGGC TTCCTGCCGC AAGAGGTCGA ACTCTTCGCC GGCAGCGTGG CCGAGAACAT CGCCCGGTTC GAGCCGGGCG CGCCGGCCGA GGCCATCATC GCGGCGGCCA AGGCCGCCGA GGTCCACGAG CTGATCCTGC GGCTGCCGGA AGGCTACGAC ACCCGCATCG GCGAGGGCGG CGCGGGTCTG TCCGCCGGGC AGCGCCAGCG CGTCGGGCTC GCCCGCGCGC TCTACCGCGA GCCCTTCCTC GTGGTGCTCG ACGAGCCCAA CGCCAATCTC GATGCCGAGG GTGAGAACGC CCTGACCCAG GCGATCCTCG GCGTACGGCA GCGCGGCGGC ATCTGCGTCG TCGTCGCCCA CCGGCCGAGC GCGCTTGCCG GCCTCGACCT GATCCTGATG ATGGCCGATG GCCGCGTCCA GGCCTTCGGG CCCAAGGACG AGATCCTCAA GCGCGTGCTG CGCCCGGCGC CGGCCCCCAT TCCGGCCGCC GCCGAGCCCG CCGTGCCCTC GATCCGTGAG AGTGCCTGA
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Protein sequence | MVNVRHEKNE IAAALARCKT AFIGVAVMSG LVNILYLTGS FFMLEVYDRV IPSRSVPTLI GLAALALVLY AFQGVLEALR GRILARVGAA LDEALSGRVF DLVVRAPLKG TTQGDGLLPL RDLDQLRAFL SGSGPSAFFD LPWMPVYLLI CFLFHPLIGV AALVGMGILA ALTFMTDRAS KGPTRAATGH GMRRNGLAEA GRRNAEVLAA MGMQERLAAR WAGANREYME AHQAVSDAGS GYGAGSKVFR MALQSGVLAL GAWLVIHNEA SAGVIIASSI LVSRALAPAE LTIANWKGFV AARQSWHRLS ELLARLPQTE RPHALPAPSE TISVEGASIA PPGTPRLVVQ DVSFGLRAGQ GLGIIGPSAS GKSSLVRALV GVWPPIRGKV RFDGAALDQW TSGDLGPHIG FLPQEVELFA GSVAENIARF EPGAPAEAII AAAKAAEVHE LILRLPEGYD TRIGEGGAGL SAGQRQRVGL ARALYREPFL VVLDEPNANL DAEGENALTQ AILGVRQRGG ICVVVAHRPS ALAGLDLILM MADGRVQAFG PKDEILKRVL RPAPAPIPAA AEPAVPSIRE SA
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