Gene Mext_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2570 
Symbol 
ID5831616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2886694 
End bp2887779 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content62% 
IMG OID641368371 
Producthemolysin-type calcium-binding region 
Protein accessionYP_001640035 
Protein GI163851992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.804479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGA TTTCGGGAAC CAACGGCGAC AACGTTCTCA ACGGCACCCT TCAAGATGAC 
GTGATTCTCG GTCTCCTTGG AAACGATGTC ATTACGGACC CGGGTGGATT CAACCGAATC
GACGGTCAGG ACGGAAACGA CACCATCACC GGCGGAAACA ACGTCGATTA CATTGCCGGT
GGGCCGGGTA ACGACACGAT TTACGGTGGC AACGGATCCG ATCAGCTGAT TGGCGAGATC
GGCAACGACA CGATCTATGG TCAGGACGGC GATGATTATG CGGCCGGCAA TCCCGGCGAC
GACGTCCTGT ACGGCGGCCG GGGCAACGAC TTTTTCGTCG GCGAGCAGGG CGCCGATCTC
GTCTTCGGCG AAGAGGGCAA TGACTTCGTC GCGGGCGGCG AGGACGACGA TACCGTCTAC
GGCGGCGACG GCAACGACCT CGTCGACGGC GATCTCGGCA ACGACGTCCT GTTCGGCGAC
GCCGGCAACG ACGTCCTGTT CGGCGATTAC GGCAATGATC GGATGTCGGG CGGAACGGGC
ACCAACACGC TCGACGGCGC CCTCGGCATA GACACGGCGG TGTTCAACTT CAATTTTGCT
CAAGCTGGCG TGACGTCCGC GGGCACGCTG TCGTCCATCG CCGGCCAGAA TTCGCTCGAT
ACGGTCAAGA ACACGGAAGT GTTCGCCTTC GCCGACCGCT CGATTCTGCA GGGTGACGGC
AACCAGGCCG TGGACGACCT GTTCTACCTC AGCCGGTACG GCGACGTTTA CCGGAACGGG
AACGACGCCG AGCAGCACTT CAGCGATTAC GGCTGGAAGG AAGGCCGCAA CCCGAACGCC
TTCTTCGACA CGAAGGGGTA CCTGGCTGCC TACGCCGATG TGGCGGCGGC CGGCATCAAC
CCCCTCGAAC ACTACCTCAC CTACGGGTGG AAGGAAGGCC GCGATCCCTC GGCCCAGTTC
GACACCAAGC AGTACCTCGC AGCCAACGGC GATGTCGCGG CGGCCGGGCT CAATCCTCTA
CTGCACTACC TCGAATACGG CGCCGTCGAG GGCCGCGCGA CGTTCAACGA CGGCACCTTC
GCCTGA
 
Protein sequence
MATISGTNGD NVLNGTLQDD VILGLLGNDV ITDPGGFNRI DGQDGNDTIT GGNNVDYIAG 
GPGNDTIYGG NGSDQLIGEI GNDTIYGQDG DDYAAGNPGD DVLYGGRGND FFVGEQGADL
VFGEEGNDFV AGGEDDDTVY GGDGNDLVDG DLGNDVLFGD AGNDVLFGDY GNDRMSGGTG
TNTLDGALGI DTAVFNFNFA QAGVTSAGTL SSIAGQNSLD TVKNTEVFAF ADRSILQGDG
NQAVDDLFYL SRYGDVYRNG NDAEQHFSDY GWKEGRNPNA FFDTKGYLAA YADVAAAGIN
PLEHYLTYGW KEGRDPSAQF DTKQYLAANG DVAAAGLNPL LHYLEYGAVE GRATFNDGTF
A