Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2480 |
Symbol | |
ID | 5835263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2781503 |
End bp | 2783011 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641368282 |
Product | type II and III secretion system protein |
Protein accession | YP_001639946 |
Protein GI | 163851903 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.906186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCG CCTCTCGCTT CCGCGGACTT GCCCTTCTCC TACTTTCCGG CGCCGGTCTC GCGTCGGCGA TGCTGTCCGG CCCGGCCTCG GCGCAAGCCG GCCTCTCCGG TGCCTCCCCC GTCCTGACGA TCGGCGCCAA CGAGGCGGCG GTCTCCCGTC GGGTCGAACT GAGCAAGGGC CGCTCCCTCA TCGTTGACCT ACCGCGCGAC GCCAAGGAAG TGTTCGTCGC CAACCCGGCG GTTGCGAACG CGGTCGTCCG CTCGAGCCGC AAGCTCTTCC TGATCGGCAT CGACAACGGC GCCACCTCGA TCTTCGTGAT GGATGGCGAG GGACGCCAGA TCGCGGCGCT CGATGTCACC ATCGCCCGCG ACATCAATGT CCTGCGGCAG TCGCTGCAGC AGAGCCTGCC CGGCGGTCGG TTCGATGTGA AAGCGGTCGG GGATTCGCTG GTTCTCTCGG GCAGCGTGAA CTCGACCTCG GAGGCGCAGC AGGCGCTCGA CATCGCCAAC GCCTTCGTCG GCATCGCGGC CGGCGGCGGC GTCGCGACTC GCGGCGCCGT CATCAACAAC CTAACGATCC GCAACAAGGA TCAGGTGATG ATCCGCGTCA CCGTGGTCGA GGTGGCGCGG ACCGTTCTGA AGCAGTTCGG TATCAGCACG AGTGGCAATT GGTCGGCTCT CAACCCGCTG GGCGGCAACT TCCTGACGAA CAATACGGGT TTTCCGTTGA CCGGTTCGCG GAGCCCGGAC GCCAACGCTC TGACGGCATC GGTCCAGACG GGCGGATTCT CCTTCAAGGC CACCTTGCGC GCCTTCGAGC AAGCCGGCGT GTCCCGCATC CTGGCCGAGC CGACGCTGAC CGCGATTTCC GGTGAGTCGG CAAAATTCAC GGCCGGAGGT GAAATTCCGG TGCCGCTGAG CTGTTCGGCG GCTTCGACGG TCTCGATCGG CACGTCGGTC AGCCAGGGCT GCGTCGTCGC GCTGACCTAC AAGCCCTACG GCGTGAGCCT ATCGTTCACT CCCGTCGTCA TGGCCGAGAA TCGGATTTCG GTCCGGATCG CCACCGATGT GGTCGATCTC GATCCCCAGA ACAGCTTCAC CTACTACCTC AACGATCGTC CGACCCCCGT GCCGGGCACG ACGAAGCGCA GCTCCGAGAC CACGGTCGAG CTCGCCTCCG GCGCGACGAT GATGACCGCG GGCCTGATCC AGCAGAAGAA CCGGGCTGCG ATCTCCGGTC TGCCCGGGCT GATGAACCTG CCGATCCTCG GTGCCCTGTT CCGCTCCCGC GATTACCAGC GGGACGAGAC CGAGTTGATG ATCATGGTCA CCCCCTACAT CGCGCAGCCG ATGGAAGCGC GGCAGGTGCA GCGGCCGGAC GACGGTTTCG TCGATGCGCC GGACGGGCAG GCGGTGCTGC TCGGACGTCT GAACAAGATC TACGGCACGG TCGGCGGCGG CACCCTCGGG CCGGCCTATC GCGGCCGGGT CGGCTTCATC GCCGACTGA
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Protein sequence | MTTASRFRGL ALLLLSGAGL ASAMLSGPAS AQAGLSGASP VLTIGANEAA VSRRVELSKG RSLIVDLPRD AKEVFVANPA VANAVVRSSR KLFLIGIDNG ATSIFVMDGE GRQIAALDVT IARDINVLRQ SLQQSLPGGR FDVKAVGDSL VLSGSVNSTS EAQQALDIAN AFVGIAAGGG VATRGAVINN LTIRNKDQVM IRVTVVEVAR TVLKQFGIST SGNWSALNPL GGNFLTNNTG FPLTGSRSPD ANALTASVQT GGFSFKATLR AFEQAGVSRI LAEPTLTAIS GESAKFTAGG EIPVPLSCSA ASTVSIGTSV SQGCVVALTY KPYGVSLSFT PVVMAENRIS VRIATDVVDL DPQNSFTYYL NDRPTPVPGT TKRSSETTVE LASGATMMTA GLIQQKNRAA ISGLPGLMNL PILGALFRSR DYQRDETELM IMVTPYIAQP MEARQVQRPD DGFVDAPDGQ AVLLGRLNKI YGTVGGGTLG PAYRGRVGFI AD
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