Gene Mext_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2325 
SymbolileS 
ID5832668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2575921 
End bp2578896 
Gene Length2976 bp 
Protein Length991 aa 
Translation table11 
GC content69% 
IMG OID641368124 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001639791 
Protein GI163851748 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.48374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.697637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC AGACCGACGC CGCCCCCGTG GCCGCCCGCG ATTATTCGCG GACCCTGTTC 
CTGCCGAAGA CCGATTTTCC GATGCGCGCG GGGCTGCCCA CCCGCGAGCC GCTCCTGCTG
GAGCGCTGGA AAGAGATCGG CCTCTACGAA AAGATCCGCG CCGCCGCGAA GGGCCGCCCG
CGCTTCGTGC TGCATGATGG CCCGCCCTAT GCCAACGGCA ACATCCATAT CGGGCACGCG
CTCAACAAGA TCCTGAAGGA CGTCGTCGTC CGCTCGCAGG GCGCGCTCGG CCGCGACGCG
AACTACGTTC CGGGCTGGGA CTGCCACGGC CTGCCGATCG AGTGGAAGAT CGAGGAGCAG
TACCGCGCCA AGGGCAAGAA CAAGGACGAG GTGCCGGTGC TGGAATTCCG CCAGCAATGC
CGGGCCTTCG CTGCCGAGTG GCTCAACATC CAGCGCGACG AGTTCAAGCG CCTCGGGGTC
ACCGGCGACT GGGATCATCC CTACTCGACC ATGGCCTATC CGGCCGAGGC GCGCATCGCC
GCCGAGTTGA TGAAGTTCGC CGCCTCCGGC CAGCTCTATC GCGGCTCGAA GCCGGTGATG
TGGTCGGTCG TGGAGAAGAC CGCACTCGCC GAGGCCGAGG TCGAGTACGA GGAGCATGTC
AGCGACACGG TGTTCGTGGC CTTCCCGATC CGCGAAGGGG CCCCGGCCGA ACTGGCGAAC
GCCCGCGTCG TGATCTGGAC GACCACGCCC TGGACGCTGC CGGCCAACCG CGCCGTCGCC
TACTCGAAGC GCGTCGCCTA CGGGCTCTAC CGCGTCACGC AAGCGGCCGA GGACAACTGG
GCGAAGGTCG GCGACAGCTA TGTCCTTGCC GACGCGCTCG CCGAGGGCGT GTTCAAGGCC
GCCCGCGTTG AGGCATTCGA GCGTGTGGCC GACGTGCCGG CGGCGAACCT AGCCGGGCTC
ACCCTGTCGC ATCCGCTTCA CGCCTTCGAT CCCGGCTACG GCTTCGCGGT GCCATTGCTG
GAGGGCGAGC ACGTCACCGA CGAGGCCGGC ACCGGCTTCG TCCACACGGC ACCGAGCCAC
GGCCGCGAGG ATTTCGAGGT CTGGATGGCC AATGGCCGCC GCCTGACGGA AGCCGGCATC
GACACCCGCA TCCCCTACAC CGTCGATGCT GATGGCATGC TGACGGAGGA GGCGCCGGGC
TTCACCGGCC GCTTCGTCTT CACCGCCAAG GGCGACAAGG GCGACGCCAA CAAGGCGCTG
ATCGCCGCCC TGACCGAGGT CGGCGCGCTG GTCGCCCGCG GGGTGCTGCG CCACCAATAC
CCGCATTCCT GGCGCTCGAA GAAGCCGGTG CTGTTCCGCA ACACGCCGCA ATGGTTCATC
GCCATGGACC GGCCGGTGGA CGCGCTCGGC AACCGCACCC TGCGCGAGAC GGCGCTCCAC
GCCATCGAGC AGACGCAGTG GGTGCCGCCG CAGGGCAGGA ACCGCATCAA CGGCATGGTC
GCGGGCCGGC CCGACTGGGT GGTCTCGCGC CAGCGCGCCT GGGGTGTGCC GATCACCGTC
TTCGTGGAGC GCGAGACCGG GAAGGTGCTG CGCGACGAGA GGGTCAACGC CCGCATCGCC
GAGGCTTTCG CCGCCGAGGG CGCGGATGCG TGGTTCGCGG AGGGCGCCAC CGAGCGCTTC
ATCGCGCCCG ATTACGATCC GGCGAACTAC GAGAAGGTGA CCGACGTTCT CGACGTCTGG
TTCGATTCCG GCTCGACCCA CGCCTTCGTG CTCGACGACG CGCAAGCCTT CCCCGGCCTC
GCCGGCATCC GCCGCGCGGT CGATGGCGGG CCCGACACGG TGATGTATCT CGAAGGCTCC
GACCAGCATC GCGGCTGGTT CCAGTCCTCG CTGCTCGAAT CCTGCGGCAC GCGGGGGCAC
GCGCCCTACG ACGTGGTGCT CACTCACGGC TTCGTTCTCG ATGCCAAGGG CGAGAAGATG
TCAAAGTCGC GCGGCAACGT CGTCGCGCCG CAGAACGTGA TCAAGGAATC GGGCGCCGAC
ATCCTCCGCC TCTGGGTCGC GGCGGCCGAC TATTCCGACG ACCTGCGCAT CGGCCCTGAG
ATCGTCAAAA CCTTCGCCGA GACCTACCGC AAGCTGCGCA ACTCGCTCCG CTGGATGCTC
GGCTCGCTCG CTCACCGGGT GCCCGGCGAC GACGTGCCGT TCACCGAGAT GCCGGAGCTG
GAGCGCTTCA TCCTGCATCG CCTGGCGCAG CTCGACGGCG AGATCCGCGA CGCCTACGCG
GCCTTCGATA CCAAGCGGAT CGTCGCGCTG CTCAACGGCT TCATGACCGG CGACCTCTCG
GCCTTCTACT TCGACGTGCG CAAGGACGCG CTCTACTGCG ATCCGATCTC CTCGGTGACC
CGCCGCGCCG CGCTTCAGGT GATCGACGAG GCGTTCCGCC GGGTCGTGAT CTGGCTCGCG
CCGGTTCTCG CCTTCACGGC GGAGGAGGCG TGGCTCGACC GCTACCCGTC GCAGGACGGC
TCGGTGCATC TCCAGACTCT GCCGGAGACG CCCGCCGCAT GGCGCGATGA TGCGCTCGCC
GCCCGCTGGC AGAAGATCCG CAAGGTCCGC CGCGTCGTCA CCGGCGCGCT CGAGATCGAG
CGCGCGGCCA AGCGCATCGG TGCCAGCCTC GAGGCGGCGC CGACGGTCTA CGTGTCGGAT
TCCGATCTGC TCGGCGCGCT CGACGGTGTG GACTTCGCCG ATACCTGCAT CACCTCGGCG
ATCACGGTGC GCGCCGGCGA GGGCCCGGCC GACGCCTTCC GTCTCGACGA GGTGAAGGGT
GTGGCCGTGG TGCCCGAGCG CGCCGAGGGC ATCAAATGCG CCCGCTCCTG GCGGGTCACG
CCAGAGGTCG GCAGCGATCC CGACTATCCC GAGGTGACGC CCCGCGACGC GCGGGCCCTG
CGGGAGTGGG ACGCCGCCCA TCCGGAGGCG GCGTGA
 
Protein sequence
MSDQTDAAPV AARDYSRTLF LPKTDFPMRA GLPTREPLLL ERWKEIGLYE KIRAAAKGRP 
RFVLHDGPPY ANGNIHIGHA LNKILKDVVV RSQGALGRDA NYVPGWDCHG LPIEWKIEEQ
YRAKGKNKDE VPVLEFRQQC RAFAAEWLNI QRDEFKRLGV TGDWDHPYST MAYPAEARIA
AELMKFAASG QLYRGSKPVM WSVVEKTALA EAEVEYEEHV SDTVFVAFPI REGAPAELAN
ARVVIWTTTP WTLPANRAVA YSKRVAYGLY RVTQAAEDNW AKVGDSYVLA DALAEGVFKA
ARVEAFERVA DVPAANLAGL TLSHPLHAFD PGYGFAVPLL EGEHVTDEAG TGFVHTAPSH
GREDFEVWMA NGRRLTEAGI DTRIPYTVDA DGMLTEEAPG FTGRFVFTAK GDKGDANKAL
IAALTEVGAL VARGVLRHQY PHSWRSKKPV LFRNTPQWFI AMDRPVDALG NRTLRETALH
AIEQTQWVPP QGRNRINGMV AGRPDWVVSR QRAWGVPITV FVERETGKVL RDERVNARIA
EAFAAEGADA WFAEGATERF IAPDYDPANY EKVTDVLDVW FDSGSTHAFV LDDAQAFPGL
AGIRRAVDGG PDTVMYLEGS DQHRGWFQSS LLESCGTRGH APYDVVLTHG FVLDAKGEKM
SKSRGNVVAP QNVIKESGAD ILRLWVAAAD YSDDLRIGPE IVKTFAETYR KLRNSLRWML
GSLAHRVPGD DVPFTEMPEL ERFILHRLAQ LDGEIRDAYA AFDTKRIVAL LNGFMTGDLS
AFYFDVRKDA LYCDPISSVT RRAALQVIDE AFRRVVIWLA PVLAFTAEEA WLDRYPSQDG
SVHLQTLPET PAAWRDDALA ARWQKIRKVR RVVTGALEIE RAAKRIGASL EAAPTVYVSD
SDLLGALDGV DFADTCITSA ITVRAGEGPA DAFRLDEVKG VAVVPERAEG IKCARSWRVT
PEVGSDPDYP EVTPRDARAL REWDAAHPEA A