| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2218 |
|---|
| Symbol | |
|---|
| ID | 5832755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2461258 |
|---|
| End bp | 2464365 |
|---|
| Gene Length | 3108 bp |
|---|
| Protein Length | 1035 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641368017 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001639684 |
|---|
| Protein GI | 163851641 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.966726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGGCC CGGTATTGGT GTTGTCGAGG AATGTGGCCG TGATCAAGCT GCCGAAGCTG
TTTCGGCCCA GGCGCCGCGA TGCCGCGATG GCCGCCCCCT TCTTCGATCC CGCCTTCTAC
CGCTCGGCCT ATCCCGACGT GGCTGCGGGC GGCGGCGACC CGCTTCGGCA CTACCTCGAC
CATGGCTGGC TGGAGGGCCG CGACCCGTCC GCGGTGTTCT CGACGCTGTT CTACGCCGAC
CGCCACTTCG CCGACCGAGC GCCGATCAAC CCGCTTCTCC ACTATGCGGG ACTCTCGCCG
ACCGAGCGGC TGCGGGTCGC GACGCAGCCG GGTTCGGATT TTCCGGCGCT CCAGGCCGGC
GTGGTCGAGC CCTATTTCGA TGCGCCGTAT TATGCCCGCC TCGCCGGTCT CGAGGGAGGC
GAGGACCCGC TCGCCCACTA CCTGACCAAG GGCTGGCGGC GCGGGCTCGA CCCGAACGAT
GCCTTCTCGG GCGACGCCTA CCTCCAGCGC CACGCGCATA TGCGGCGCCT CGGCGTCAGC
CCGCTCTATC ATTTTGCCGC GACGCGACGG CTCCAGGCCT CGGAGGCCGC CGCCCCGCCC
GCGCGGCGTG CCAAGCCGCA GGCAGCACTG CTTCCCGCCG ACCCGGCCGA AGCCTCCGAC
GCGCAGATCT ACGAGACGGT GGCGGCGGCC TTCGACCGGG AGCACTACCT CGACACCAAT
CCCGACATCC GCCGCTCCGG CATCGATCCG GTCCGCCATT TCCTCGATTT CGGCGCCCGC
GAGGACCGCG ACCCGAGCCC CGACTTCTCG GTGCGCTTCT ACCGCAAGCA TTACCGGCGG
GAGATCGGGG CCGGGGTGAA CCCGTTCTTC CACTACCTCG CGGTGGGCCG GGCGCGCGGC
TTCCGGCCGA CACCGTTCGG TCTCGGAACC TGGCCCCCGC AGGTCGCGCC GACCCCGGCC
GAGTGGGAAC AGGCGCAGCC TGCCGCCGAC ATCGCAGCGG CGCGGGTCGT GCTGATCATG
CCCGTCTACA AGGGCTACGA CGACACCCTG CGGGCGATCC ACTCGGTGCT GAGCGAGGAG
CAGGCCACGC CCTTCGCCCT CCTCGTCATC GACGATTGCA GCCCCGATCC GCGCCTGAGC
GCGGCACTGG CCGAGCTCGG CGGCCGCGGC CTCTTCGCCC ACCTCGTCAA CGAGGCGAAT
CTCGGCTTCG TACGGACCTG CAACCGCGGC CTGGGGCGGG CCGCGGGCAA GGACGTCGTG
CTCCTCAATG CCGACGTCGT CGTTTACGGC GACTGGCTCG ACCGCCTGCT CTGGCACCTC
GACGCCGACC CCCGCGTCGC GACGGTCACG CCGTTTTCAA ACAACGCCAC GATCTGCAGT
TATCCGCGGC CCAACGTCGA CAATCAGGCC CGGCTCGAGA TCACGCCCGC CGAGATCGAC
GCCTTCACCC GCGCCTGCAA CGCCCGCACG AGTTCGCCGG TGCCGACCGG CGTCGGCTTC
TGCATGGCGA TGCGCCGGGA GGCGATCGCG GCGGTGGGGC TCCTCGACGC CGAGACCTTC
GGGCGCGGCT ACGGCGAAGA GAACGATTTC TGCATGCGCG CCCTCAAGGC GGGCTTCACC
AACGTGCTGG CCCACGACAT CTTCGTGTTC CATTCCGGCA GCGTCTCCTT CGGCGCGCTG
CTCGCGACCA AGGGCGCGGA CATCTTCCGC GCGATCCTGA CCAAGCACCC CGACTACCAG
CGCCGGGTCC ACAACCACAT CGAGGTCGAT CCCGCGCGCT TCGCCCGGCG CCGCCTCGAC
CTCTACCGCT TCGCCCGGCG CGCCACGGCC AGCGCCGAGC GCGGCATCGC CCTGATCGTG
ACCCACGATT TCGGCGGCGG GGTCGAGACC CATATCGAGG CGCTGAGCCT CCGGCTCGCC
GAGGCCGGTC TCGCCGTCGT CTATCTGCGC ACCGACGAGC CCGGCGGGTT CAGGCTCGGC
CTGCCCGGAT CGGGCGGGAT CGACTTCCCC GTTTCGATCC TCGATCCGCT CTCCCTCGAC
CGGGATGCGG ATCTCCTCGC CGAGCTGATC GGTTGGCTCG CCCCGGCAAT GGTGCATGTG
CACTCGCTGG CGGGGCTCGA TGCCCCCTCG ACCCGCGCGG CGATGCAGCT GATTGAGGAG
GCCGGCACCG GCTACGACGT GACGCTGCAC GACTACGCCT CGGTCTGCCA CCGCAACAAC
CTCGTGCGGT CCGACGGCGT CTATTGCGGG TTGGCGGAAC CCGCCGTCTG CCGCGACTGC
ATCCGCCTCG ATCGCGACGC CGACGGGATC GTGCTGCCCG ATCCCGCTGA GCGGCGGCGG
GACTGGGCCG GGTTCCTCGA CCGCGCCCGG ACGGTGTTCG CCCCCTCCGC CGACCTCGCG
GATCGAATCG GCAGCACGCT GCACCTCGAC CGCATCGCGG TGCGCCCGCA CGAGGAGACG
CTGGCCGGCG TGGAGCTCAA GGCGCGCCAG CGCCGGGAGG GGCCGCTGCG GGTCGCGGTG
ATCGGATCGA TCGGCGCGCA CAAGGGCTAC GACGTCGTCC ACAACCTCGC CCTCGATGCC
CGGCTGCGGC AATTGCCGAT CGTGTTCACG ATCATCGGCC ACTCCGCCGA GCCGCGCGCC
ATGGAGGCGG CGGGCGTGCG CGAGACCGGC CTCTATGGCA GCGACGCGGC GGCGCTCGCC
GAGATCGCCC GGCTCGATCC GGACCTCGTT CTGCTCCCCT CGATCTGGCC GGAGACCTAC
TGCTACACGC TCTCGCTGGC GCTGGCGGCG GGGGTGCCGC CGGTGGTGTT CGATCTCGGC
GCCCAGGCCG AGCGGCTGCG CGAAAGCGGG GCGGGGCATG GCCTCGACCC GGCCCTGGCC
GATGATCCGC AGAGGCTGAA CGCGGCCCTG CTCGCGCTTC CCATCGACGC GCTCTGGGCC
GCCCGCGAGC CGTTCCGGCC GACCGTCTAC CCGCGGATTC TGGAAGATTA TTACGGGCTC
GACGCGGCCG CCCTGTCGAA CGTCTCGCCC GAGGCGGGGA GGGAAGGGGT CGCGCCGGTG
GATCACCGAG ACGGGCTCCG CTCCGCGCCA TCCCCCCAGA TGTCATAG
|
|---|
| Protein sequence | MRGPVLVLSR NVAVIKLPKL FRPRRRDAAM AAPFFDPAFY RSAYPDVAAG GGDPLRHYLD
HGWLEGRDPS AVFSTLFYAD RHFADRAPIN PLLHYAGLSP TERLRVATQP GSDFPALQAG
VVEPYFDAPY YARLAGLEGG EDPLAHYLTK GWRRGLDPND AFSGDAYLQR HAHMRRLGVS
PLYHFAATRR LQASEAAAPP ARRAKPQAAL LPADPAEASD AQIYETVAAA FDREHYLDTN
PDIRRSGIDP VRHFLDFGAR EDRDPSPDFS VRFYRKHYRR EIGAGVNPFF HYLAVGRARG
FRPTPFGLGT WPPQVAPTPA EWEQAQPAAD IAAARVVLIM PVYKGYDDTL RAIHSVLSEE
QATPFALLVI DDCSPDPRLS AALAELGGRG LFAHLVNEAN LGFVRTCNRG LGRAAGKDVV
LLNADVVVYG DWLDRLLWHL DADPRVATVT PFSNNATICS YPRPNVDNQA RLEITPAEID
AFTRACNART SSPVPTGVGF CMAMRREAIA AVGLLDAETF GRGYGEENDF CMRALKAGFT
NVLAHDIFVF HSGSVSFGAL LATKGADIFR AILTKHPDYQ RRVHNHIEVD PARFARRRLD
LYRFARRATA SAERGIALIV THDFGGGVET HIEALSLRLA EAGLAVVYLR TDEPGGFRLG
LPGSGGIDFP VSILDPLSLD RDADLLAELI GWLAPAMVHV HSLAGLDAPS TRAAMQLIEE
AGTGYDVTLH DYASVCHRNN LVRSDGVYCG LAEPAVCRDC IRLDRDADGI VLPDPAERRR
DWAGFLDRAR TVFAPSADLA DRIGSTLHLD RIAVRPHEET LAGVELKARQ RREGPLRVAV
IGSIGAHKGY DVVHNLALDA RLRQLPIVFT IIGHSAEPRA MEAAGVRETG LYGSDAAALA
EIARLDPDLV LLPSIWPETY CYTLSLALAA GVPPVVFDLG AQAERLRESG AGHGLDPALA
DDPQRLNAAL LALPIDALWA AREPFRPTVY PRILEDYYGL DAAALSNVSP EAGREGVAPV
DHRDGLRSAP SPQMS
|
|---|
| |