| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2186 |
|---|
| Symbol | rplF |
|---|
| ID | 5834722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2437898 |
|---|
| End bp | 2438431 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641367984 |
|---|
| Product | 50S ribosomal protein L6 |
|---|
| Protein accession | YP_001639652 |
|---|
| Protein GI | 163851609 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0097] Ribosomal protein L6P/L9E |
|---|
| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.788947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGCG TAGGCAAGAA GCCCGTCCCC GTCCCGTCTG GCGTCACCGC CACGGTCACG
GGTCAGACGG TGAAGGTGAA GGGCTCGAAG GGCGAACTCC AGTTCGTCGT CCCGTCCCAG
GTGGTCGTCG AGTTCAAGGA CGGCGCCGTC TCGGTGCAGC CCAAGGACCA GTCGAAGCAG
GCCCGCTCCC TGTGGGGCAC CTCGCGCGCC CAGGTGGCGA ACCTCGTCGA GGGCGTCTCC
AAGGGCTTCG AGAAGAAGCT GGAGATCACG GGCGTCGGCT ACCGCGCCGC GATGGCCGGC
AAGGCGCTCA AGCTCTCGCT CGGCTACAGC CACGACATCG AATACGAGAT CCCGGCCGGC
ATCACGATCG TGACGCCCAA GCCCACGGAG ATCGTGGTGT CGGGCATTGA TCGGCAGCGC
GTCGGTCAGG TCGCGGCGGA GATTCGCGAG TATCGCGGTC CCGAGCCCTA TAAGGGCAAG
GGCGTGAAAT ACGCTGGCGA ATTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA
|
|---|
| Protein sequence | MSRVGKKPVP VPSGVTATVT GQTVKVKGSK GELQFVVPSQ VVVEFKDGAV SVQPKDQSKQ
ARSLWGTSRA QVANLVEGVS KGFEKKLEIT GVGYRAAMAG KALKLSLGYS HDIEYEIPAG
ITIVTPKPTE IVVSGIDRQR VGQVAAEIRE YRGPEPYKGK GVKYAGEFIF RKEGKKK
|
|---|
| |