| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2163 |
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| Symbol | rplD |
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| ID | 5835271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2422110 |
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| End bp | 2422730 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641367961 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001639629 |
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| Protein GI | 163851586 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.591953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTCG ATATCACCAC GCTCGACGGC GGCTCCGCCG GCTCGGTCGA GCTCAACGAG
GCGATCTACG GCCTCGAGCC GCGCGCCGAC ATCCTGCAGC GGATGGTGCG CTACCAGCTC
GCCAAGCGGC GCGCCGGCAC GCACGCCGTC AAGAACCGCT CGGACGTCGA TCGCACGTCG
AAGAAGCTGT ACAAGCAGAA GGGCACCGGC AACGCCCGTC ACGGCGCTGC CTCCGCTCCG
CAGTTCCGCG GCGGCGGCCG GGCCTTCGGT CCGGTGGTGC GCGACCACAG CCACGACCTT
CCCAAGAAGG TCCGCGCGCT GGCGCTCAAG CACGCCCTCT CGGCCAAGGC CAAGGCGTCG
ACCCTGATCG TCGTCGACGA CATCAAGGTC GACAACCACA AGACCAAGGC CATGATCGAG
CGCTTCGAGA AGCTCGGTCT GTCGAGCGCG CTGATCATCG GCGGCTCTGA AGTGGACGAG
AACTTCGGCC GCGCCGCCCG CGCCATTCCG AAGATCGATG TGCTGCCCGT CCAGGGCATC
AACGTCTACG ACATCCTGCG CCGCGACACG CTCGTGCTGA CGCGCGCCGC CGTCGATGCG
CTGGAGGAGC GTTTCAAATG A
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| Protein sequence | MKLDITTLDG GSAGSVELNE AIYGLEPRAD ILQRMVRYQL AKRRAGTHAV KNRSDVDRTS
KKLYKQKGTG NARHGAASAP QFRGGGRAFG PVVRDHSHDL PKKVRALALK HALSAKAKAS
TLIVVDDIKV DNHKTKAMIE RFEKLGLSSA LIIGGSEVDE NFGRAARAIP KIDVLPVQGI
NVYDILRRDT LVLTRAAVDA LEERFK
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