| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2106 |
|---|
| Symbol | |
|---|
| ID | 5831462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2365089 |
|---|
| End bp | 2366165 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641367903 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_001639572 |
|---|
| Protein GI | 163851529 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0121785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG CGCTCTTCCC CCTCGCCCGG CCGCTGCTGC ACGGGCTCGA CGCCGAGACG
GCGCACGACG TGACGATTCG CGGCCTGTCG CTGCTGCCGC CGCGGCGTCC GCCGGCCGAC
GACGCGTCCC TCGCCGTCGA GTTGTTCGGG CAGAGCTTTC CCAATCCGGT CGGCCTCGCC
GCCGGATTCG ACAAGGGCGC GCGGGTGGCC GACGCGCTGC TCGGCCTCGG TTTCGGCTTC
GTCGAGGTCG GCGGAGTCGT GCCGCAGCCC CAGCCCGGCA ATCCACGCCC GCGGGTGTTC
CGCCTCCCCC GCGACCGGGC GGTGATCAAC CGCTTCGGCC TCAACAGCGA GGGGCTCGAC
GCGGTGGCCG ACCGGCTCAA GGCCCGCGCC GGCCGCGAGG GGATCGTCGG CGTCAACATC
GGCGCCAACA AGGAATCGGC GGACCGCCTC GCCGACTACG TCGCCTGCAC CGCGCGGCTC
GCCCCGCATG TCGCCTTCAT CACCGTCAAC GTCTCCTCGC CCAACACGCC GGGCCTGCGC
GACCTTCAGG GCGAAGCCTT CCTCGACGAC CTGCTCGCCC GCGTCGTCGC CGCCCGCGAC
GCCAGCGGAT CGAGCGCCGC CGTGCTCCTC AAGATCGCGC CCGACATCGC GCTCGAAGGG
CTCGACGCCA TGACGGCGAC GGCGCTTCGG CGCGGCATCC AGGGCCTCGT CGTTTCGAAC
ACGACGATCG CCCGGCCGAC GTCCCTCGTG GAATCCTCCG TCGCAAAGGA AACCGGCGGC
CTGTCCGGAC GGCCGCTGTT CGGCCCGTCG ACGCGGCTGC TGGCCGAGAC CTATCTGCGC
GTCGGCGACC GGATCCCGCT GATCGGCGTC GGCGGCATCG ATTCGGCGGA GGCCGCCTGG
ACCAAGATCC GGGCCGGTGC GCGCCTCGTC CAGCTCTACT CCGCCCTCGT CTACGAGGGA
CCGGGGCTGG TCGGCACGAT TAAGCGCGGC CTGAGCCAGC GGCTGCGGGC GGAGGGCCTG
ACGAGCCTCG CCCCGGTCGT CGGGCGGGAC GCGGCCGCCC TCGCGCGGGA CGCCTAA
|
|---|
| Protein sequence | MIDALFPLAR PLLHGLDAET AHDVTIRGLS LLPPRRPPAD DASLAVELFG QSFPNPVGLA
AGFDKGARVA DALLGLGFGF VEVGGVVPQP QPGNPRPRVF RLPRDRAVIN RFGLNSEGLD
AVADRLKARA GREGIVGVNI GANKESADRL ADYVACTARL APHVAFITVN VSSPNTPGLR
DLQGEAFLDD LLARVVAARD ASGSSAAVLL KIAPDIALEG LDAMTATALR RGIQGLVVSN
TTIARPTSLV ESSVAKETGG LSGRPLFGPS TRLLAETYLR VGDRIPLIGV GGIDSAEAAW
TKIRAGARLV QLYSALVYEG PGLVGTIKRG LSQRLRAEGL TSLAPVVGRD AAALARDA
|
|---|
| |