| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2088 |
|---|
| Symbol | |
|---|
| ID | 5833174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2330487 |
|---|
| End bp | 2331767 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641367886 |
|---|
| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
|---|
| Protein accession | YP_001639555 |
|---|
| Protein GI | 163851512 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.747322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.143185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA CGAATCGTCC CCCTCGGGAT CGCCGCGCCG GCAGCCGCGG CTTGCTCGTC
GCCGGGGCCG GCATTCCGGG CCTGACCCTA GCGGTCGCCC TGAAGCAGGC GCACGGGGCG
GCGCTCGATG TGACGGTCTG CGATCCGGGT TTGGAGGCCG GTGCGGCGCG CCATCGCGGG
CGCGCCTACG CCGTGGCGGC CGGGCCGCGG CGCATGTTCG AGCAGCTCAG GCTCTGGTCG
CGGATCGAAC CGGCGGCGGA GCCGATGCGC CGGCTGGTCA TCAGCGACAG CCGGGTCGGC
GATCCGGTGC GGCCGGTCTT CCTGACCTTC GGCGACGGGA CAGAGGCGCG CGACGCGGGC
GAGCCCTTCG CCCACATGGT CGAGGCCGAG CCGATGGTCG CCGTGCTGCT CGACGCCGCG
CGGGAAACGG GCGTCCACCT CGCCGCCTCA AGTGTTACCG CCGCCGTGCC GGGCCCGCGC
GCGACCCAAG TGACCCTGAG CGACGGCAGC AGCGACGAGG TCGCGCTCGT GGTCGCCGCC
GACGGGGCGC GCTCGGCCCT GCGCGAGGCC GCCGGCATCG GCTGGGTCGG CTGGTCCTAC
CCGCAATCGG GTATCGTCGC GACGATTCAG CATGCCCGCG ACCATGAGGG CCGAGCCTTC
GAGCATTTCC TGCCGAGCGG CCCCTTCGCA ATCCTGCCGC TCAAGGCGGG CGGCGCACTC
GGCCACCGCT CCTCCATCGT CTGGACCGAG CGCAGCGCCG ACGTGCCGGC CCTGCTCGGC
GGGGATGCCG CCGAGACGCT GGCCGAGATC GAGCGCCGGT TCGGGGCCGA ACTCGGGCGC
ATCGCCCTGG AGCACGGGCC GAGCGCCCAT CCGCTGCATC TCGGCCTCGC TCGCAGCTTC
CGGGCGCCCC GCCTCGCGCT GCTGGGGGAC GCCGCCCACG TCATCCATCC GCTGGCGGGC
CAGGGGCTCA ATCTCGGCCT CGCCGGGGCC GCGGCCCTGG CCGAGGCGGT GACCGGTGCC
CTGCGGCTCG GGCTCGATCC CGGCGCGGAT GCGGTCTTGC GCGATTACGA GCAGGCGCGC
CGCTTCGATT CCGTCGCGAT GGCGGCGGCG ACGGATGGGC TCAACCGCCT GTTCTCGAAT
GACAGCATGG CGCTGCGCCT CACCCGCGAT TTCGGCCTCG GCCTCGTCGA CCGGATGCCG
GGCCTGAAGC GCTTCTTCAT CGGCCAGGCA TCGGCGCTGC GAGGCGGGAC CCCACGCCTG
CTGCGGGGTG AAGCCCTGTG A
|
|---|
| Protein sequence | MSATNRPPRD RRAGSRGLLV AGAGIPGLTL AVALKQAHGA ALDVTVCDPG LEAGAARHRG
RAYAVAAGPR RMFEQLRLWS RIEPAAEPMR RLVISDSRVG DPVRPVFLTF GDGTEARDAG
EPFAHMVEAE PMVAVLLDAA RETGVHLAAS SVTAAVPGPR ATQVTLSDGS SDEVALVVAA
DGARSALREA AGIGWVGWSY PQSGIVATIQ HARDHEGRAF EHFLPSGPFA ILPLKAGGAL
GHRSSIVWTE RSADVPALLG GDAAETLAEI ERRFGAELGR IALEHGPSAH PLHLGLARSF
RAPRLALLGD AAHVIHPLAG QGLNLGLAGA AALAEAVTGA LRLGLDPGAD AVLRDYEQAR
RFDSVAMAAA TDGLNRLFSN DSMALRLTRD FGLGLVDRMP GLKRFFIGQA SALRGGTPRL
LRGEAL
|
|---|
| |