Gene Mext_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2062 
Symbol 
ID5834839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2298157 
End bp2298816 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID641367860 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_001639529 
Protein GI163851486 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.223849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCTC CGGCTCCGAA GAAGCGCGTC GCGATCCTGA TCTCGGGTCG CGGCTCGAAC 
ATGGTCTCCC TGATCGAGGC GGCGCGCGCC CCCGATTATC CGGCCGAGAT CGTGCTCGTG
CTCTCGAACC GCCCCGACGC CGCCGGCCTC GACCGCGCGC GGGCGGCGGG CATCCCGGCC
CGCGCCATCG ACCACAAGGC GTTTCCCGAC CGCGCCCGCT TCGACGCCGC GCTCCAGGCG
GAGCTGGACG AAGCGGGCAT CGAGCTGATC GTGCTCGCCG GCTTCATGCG CATCCTCACC
GACGCCTTCG TCGAGGCTTG GAGCGGCCGG ATGATCAACA TCCACCCCTC GCTGCTGCCG
CTGTTCAAGG GCACGTACAC CCATGAGCGC GCGCTGGATG CCGGCGTGCG CCTGCATGGC
TGCACCGTGC ATTACGTCGT GCCGGAACTC GATGCCGGCC CGATCGTCGC CCAGGCCGCC
GTGCCGGTTC TGCCGGGCGA CGACGCCGAC ACGCTGAGCG CCCGGGTGAT CGTGCAGGAG
CACCGGCTCT ACCCAGCAGC ACTCGCCCTG ATCGCGGGCG GCGGCGCCGC GTTGGAAGGC
GGCCGCGTGC GCTTCACGAC GCAGGCGCGC GACGCCGGAG CCGCGCTCCT CTCGCTCTGA
 
Protein sequence
MSAPAPKKRV AILISGRGSN MVSLIEAARA PDYPAEIVLV LSNRPDAAGL DRARAAGIPA 
RAIDHKAFPD RARFDAALQA ELDEAGIELI VLAGFMRILT DAFVEAWSGR MINIHPSLLP
LFKGTYTHER ALDAGVRLHG CTVHYVVPEL DAGPIVAQAA VPVLPGDDAD TLSARVIVQE
HRLYPAALAL IAGGGAALEG GRVRFTTQAR DAGAALLSL