Gene Mext_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2045 
Symbol 
ID5834774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2280508 
End bp2281674 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID641367843 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_001639512 
Protein GI163851469 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.151029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC GCATCCGCGA TTACCTGCGC GCGCGCCGCG ACCTCGGCCA GGACGAGGGC 
CCGGTGATGG TCCTCGACCT CGATGTCGTG CGCGAGAACT ATACGGCCTT CGCCCGCGCG
CTGCCCGACA CCCGCGTGTT CTACGCCGTG AAGGCGAACC CGGCCGCGGA AGTGCTGCGC
CTGCTCGCCG AGATGGGCTC CTGCTTCGAC ACGGCTTCCG TGGCCGAGAT CGAGATGGCG
CTCGCCGCCG GCGCTACCGC CGACCGCGTC TCCTTCGGCA ACACCATCAA GAAGGAGCGC
GACGTCGTCC GCGCGCTCAA GCTCGGCATC CGGCTCTTCG CCGTCGATTG CCAGGCCGAG
GTCGAAAAGA TCGTTCGCGC GAGCGAGGCG GCCGGCATCG CGGCCGGCGA GGTGCAGGTG
TTCTGCCGCA TCCTCTGCGA CGGCGCCGGT GCGGATTGGC CGTTGTCGCG CAAGTTCGGC
TGCGAGCCGG AGATGGCGGT GAACGTGCTG GAGCACGCCC ACCGGCACGG CCTCAATGCC
TACGGCGTCT CGTTCCATGT CGGTTCGCAG CAGGCCAACA CGGAAGCCTG GGACGGGGCG
CTCGCCTCCG CCTCCGAGAT CTTCCGTGAA TGCGCGCTTC GCGGCATCGG CCTATCGATG
GTCAACCTCG GCGGCGGCTT CCCGACCAAG TACCTCAAGC AGGTGCCGGG CGTGGAAACC
TACGGCGACG CGATCTTCCG CGCGCTCACC AAGCATTTCG GCAACCGCAT CCCCGAGACG
ATCATCGAGC CGGGCCGCGG CATGGTCGGC AATGCCGGCC TGATCGAGGC CGAGGTCGTG
CTCGTTTCCA AGAAGTCGGA GGCCGAGGAC GAGGTGCGCT GGGTCTATCT CGACATCGGC
AAGTTCGGTG GGCTGGCCGA GACCATGGAC GAGTCGATCC GCTACGCGAT CCGCACCGAC
CACGACGAGG ACCGCATGGC ACCCTGCGTC GTCGCCGGCC CGACCTGCGA TTCGGTCGAC
GTGCTCTACG AGAAGAACCA CTACCCGCTG CCGGTCTCCC TCTCGATCGG CGACAAGGTG
TGGATCGAAG GCGCGGGCGC CTACACCACG ACCTACGCGG CGGTCGCCTT CAACGGCTTC
CCGCCCCTCG CGCAGATCGT GATCTGA
 
Protein sequence
MTDRIRDYLR ARRDLGQDEG PVMVLDLDVV RENYTAFARA LPDTRVFYAV KANPAAEVLR 
LLAEMGSCFD TASVAEIEMA LAAGATADRV SFGNTIKKER DVVRALKLGI RLFAVDCQAE
VEKIVRASEA AGIAAGEVQV FCRILCDGAG ADWPLSRKFG CEPEMAVNVL EHAHRHGLNA
YGVSFHVGSQ QANTEAWDGA LASASEIFRE CALRGIGLSM VNLGGGFPTK YLKQVPGVET
YGDAIFRALT KHFGNRIPET IIEPGRGMVG NAGLIEAEVV LVSKKSEAED EVRWVYLDIG
KFGGLAETMD ESIRYAIRTD HDEDRMAPCV VAGPTCDSVD VLYEKNHYPL PVSLSIGDKV
WIEGAGAYTT TYAAVAFNGF PPLAQIVI