Gene Mext_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2024 
Symbol 
ID5831786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2257312 
End bp2258091 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID641367824 
Productcyclic nucleotide-binding 
Protein accessionYP_001639493 
Protein GI163851450 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.996332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA CTGTGACGCT CACGCGCACG AACCCTCTGA TCCTCCGGCT TCGCTACGGC 
GCGGATCTCG ACGCCGGGGA TCGAGCCCTT TTGGCCGACC TGTCCCGCTC CAGCCGCAGC
CTGGAGCCGC AGCAGGATAT CGTGCGGGCC GGCGACCGGG CGGCGGGTGT CCACCTCGTC
CTCGAAGGCT ACGCCTTCCG CTACAAGCTC ATCGATGACG GGCAACGCCA GATCCTCGGC
CTGCTCCTGC CGGGCGATTT CTGCGATCTG CAATCGATCG TGCTCGGCCC GTCCGACCAC
TACATCGCCG CGCTGACCGC CTGCACCGTC GCTGACATCC CGCAGGACCG GGTCGATGAC
CTGGTTTTCC GCGATTCGCG TCTCGCCCGG GCGCTGTGGT GGGCGACCCT GGTCGATGAG
AGCATCCTGC GGGAATGGCT CGCGAGCATG GGCCAGCGCT CCGCCGACAA GCGCATCGCC
CACCTGTTCT GCGAATTGCT GCTGCGGCAG CAGCTCGTCG GGACGGCCGG GGAGCGCGAC
TGTCCGTTGC CTCTGACCCA GCCGATGCTC GCCGACATCC TTGGCATCAC GACGATCCAT
GTCAGCCGCA TCCTGCGCGA CCTGCGCCTT GCCGGGCTGA TCCAGTTGAA GGAGCGCCGG
CTGCACGTTC CGGACGTCAA GCGCCTGCAG GCGTTCTGCG ACTTCGATCC GACCTATCTG
CACCTCGTCA GGATGCCCGA TCGCGAGGCC GCCGAGGATC GGACGCGCGC CGGGCCCTGA
 
Protein sequence
MDATVTLTRT NPLILRLRYG ADLDAGDRAL LADLSRSSRS LEPQQDIVRA GDRAAGVHLV 
LEGYAFRYKL IDDGQRQILG LLLPGDFCDL QSIVLGPSDH YIAALTACTV ADIPQDRVDD
LVFRDSRLAR ALWWATLVDE SILREWLASM GQRSADKRIA HLFCELLLRQ QLVGTAGERD
CPLPLTQPML ADILGITTIH VSRILRDLRL AGLIQLKERR LHVPDVKRLQ AFCDFDPTYL
HLVRMPDREA AEDRTRAGP