| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1956 |
|---|
| Symbol | |
|---|
| ID | 5831939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2188953 |
|---|
| End bp | 2189747 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641367757 |
|---|
| Product | exodeoxyribonuclease III Xth |
|---|
| Protein accession | YP_001639426 |
|---|
| Protein GI | 163851383 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0751549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCA CCACCTGGAA CGTCAATTCG ATCAAGCAGC GGGTCGGCCA CCTGCTGGGC
TTCCTCGACG AGGCCAAGCC CGACGTGGTC TGCCTGCAGG AGCTGAAATG CCAGGACGCG
TCCTTCCCCC GCGAGGAGAT CGAGGCGGCG GGCTACGCGG TCGAGACGCT GGGGCAGAAG
GCCTATAACG GCGTCGCCCT GCTGGTGCGC GCGCCACTCC AGTACACCCA GCTGCTGCGC
GGCCTGCCCG GCGACGCCGA GGACGAGCAG GCGCGCTACA TCGAGGCGCT GGTGCATGGC
GAGGGCGTGG CGCCGGTGCG GGTCGCCTCG ATCTACCTGC CGAACGGCAA CCCGGCCCCG
GGCCCGAAAT ACAGCTACAA GCTCGCCTTC ATGGCCCGCC TGCGGTCCCA TGCCCGCGCG
CTGATGACGA CCGAGGAAGC GCTGGTGCTG GCGGGCGACT TCAACGTCAT CCCCGAGCCC
GAGGACGCTG CCGACCCCAC CGTCTGGACG CAGGACGCCC TGTTCCTGCC CGAGACCCGC
CGCGCCTTCC GCGCGCTGCT GGCGGAAGGT TTTACGGATG GCCTGCGGGC TTGCGAGCCG
AGCGCCGGCC TCTACACCTT CTGGGACTAT CAGGCCGGAT GCTGGCCGCG GAACCAGGGC
ATCCGCATCG ACCACCTGCT GCTCTCGCCG CAAGCCGCCG ACCGCCTCGT CTCGGCCTCG
GTGCAGCGCC ACCTGCGCGG GCTGGAGAAA CCGTCGGACC ACGTGCCGGT GACGGTGGAG
CTGAGCGACG GGTAA
|
|---|
| Protein sequence | MRITTWNVNS IKQRVGHLLG FLDEAKPDVV CLQELKCQDA SFPREEIEAA GYAVETLGQK
AYNGVALLVR APLQYTQLLR GLPGDAEDEQ ARYIEALVHG EGVAPVRVAS IYLPNGNPAP
GPKYSYKLAF MARLRSHARA LMTTEEALVL AGDFNVIPEP EDAADPTVWT QDALFLPETR
RAFRALLAEG FTDGLRACEP SAGLYTFWDY QAGCWPRNQG IRIDHLLLSP QAADRLVSAS
VQRHLRGLEK PSDHVPVTVE LSDG
|
|---|
| |