Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1948 |
Symbol | |
ID | 5831384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2176602 |
End bp | 2177906 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641367748 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_001639418 |
Protein GI | 163851375 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.286781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCG CGATGATTGG CTCGGGCTAT GTCGGCCTCG TGTCGGGCGC CTGCCTCGCC GATTTCGGCC ACGAGGTCGT CTGCATCGAC AACGATCCCG GCAAGATCGC CGCCCTCAAC GAGGGCCGCA TGCCGATCTA CGAGCCCGGC CTCGACGCCC TCGTCGCCGA GAACGTGCGC GCCAAACGCC TCACCTTCTC CACCGACCTC AAGCCTGCCG TGGCGCAGGC GCAAGCCGTG TTCATCGCCG TCGGCACCCC GTCCCGCCGC GGCGACGGCT TTGCCGACCT CTCCTACGTC TATGCCGCGG CCCGTGAGAT CGCCGAGGCG CTCACCGGCT ACACCGTGGT CGTCACCAAA TCGACCGTGC CCGTTGGCAC CGGCGACGAG GTCGAGCGCA TCCTGCGCGA GGCCCGCCCC GACATCGATG TCGGCGTCGC CTCGAACCCC GAGTTCCTGC GCGAGGGTGC CGCCATCGGC GATTTCAAAC GGCCCGATCG CATCGTCATC GGCGCCGAGG ACAACCGCGC CGCCGCCGTG ATGCAGGAGG TCTACCGCCC GCTCTACCTC AACGCCGCGC CGATCCTGCT CACCGGACGG CGTACGGCCG AGCTGACCAA GTATGCCGCC AACGCGTTCC TGGCCACCAA GATCACCTTC ATCAACGAGA TCGCCGATCT GTGCGAGCAG GTCGGGGCCA ACGTGCAGGA GGTCGCCCGC GGCATCGGCC TCGACAACCG CATCGGCGGC AAGTTCCTGC ATGCGGGGCC GGGCTATGGC GGCTCGTGCT TCCCCAAGGA TACGCTGGCC CTGGTGAAGA CGGCGCAGGA TTACGGCACG CCGGTTCGGA TCGTCGAGAC GGTGGTGGCC GTCAACGATC AGAGGAAGCG CGCGATGGCG CGCAAGGTGA TCGCGGCCTG CGGCGGGTCG GTGCGGGGCA AGCGGGTGGC GCTCCTGGGC CTGACGTTCA AGCCGAACAC CGACGACATG CGCGACGCGC CCTCGCTGTC GATCATCGCC GGCCTGCAGG ATGCGGGTGC ACAGATCGTG GCCTACGATC CCGAGGGGAT GGAGCAGGCG CGACCGCTGC TTCACGGGGT CGCTTACGCC GAGGACGCCT ATGCCTGCGC CGAAGGCGCC GACGCTCTGG TGATCGTGAC GGAGTGGAAC GCGTTCCGGG CGCTCGATCT CGCCCGGCTC AAAGGGCTGA TGCGCGCCCC CGTCCTCGTC GATCTGCGCA ACGTCTACGC GCCCGCGGAG ACCGAACGGC ACGGCTTCGC CTATTCCGGC ATCGGCGTTG CGTGA
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Protein sequence | MRIAMIGSGY VGLVSGACLA DFGHEVVCID NDPGKIAALN EGRMPIYEPG LDALVAENVR AKRLTFSTDL KPAVAQAQAV FIAVGTPSRR GDGFADLSYV YAAAREIAEA LTGYTVVVTK STVPVGTGDE VERILREARP DIDVGVASNP EFLREGAAIG DFKRPDRIVI GAEDNRAAAV MQEVYRPLYL NAAPILLTGR RTAELTKYAA NAFLATKITF INEIADLCEQ VGANVQEVAR GIGLDNRIGG KFLHAGPGYG GSCFPKDTLA LVKTAQDYGT PVRIVETVVA VNDQRKRAMA RKVIAACGGS VRGKRVALLG LTFKPNTDDM RDAPSLSIIA GLQDAGAQIV AYDPEGMEQA RPLLHGVAYA EDAYACAEGA DALVIVTEWN AFRALDLARL KGLMRAPVLV DLRNVYAPAE TERHGFAYSG IGVA
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