Gene Mext_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1948 
Symbol 
ID5831384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2176602 
End bp2177906 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content69% 
IMG OID641367748 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_001639418 
Protein GI163851375 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.286781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CGATGATTGG CTCGGGCTAT GTCGGCCTCG TGTCGGGCGC CTGCCTCGCC 
GATTTCGGCC ACGAGGTCGT CTGCATCGAC AACGATCCCG GCAAGATCGC CGCCCTCAAC
GAGGGCCGCA TGCCGATCTA CGAGCCCGGC CTCGACGCCC TCGTCGCCGA GAACGTGCGC
GCCAAACGCC TCACCTTCTC CACCGACCTC AAGCCTGCCG TGGCGCAGGC GCAAGCCGTG
TTCATCGCCG TCGGCACCCC GTCCCGCCGC GGCGACGGCT TTGCCGACCT CTCCTACGTC
TATGCCGCGG CCCGTGAGAT CGCCGAGGCG CTCACCGGCT ACACCGTGGT CGTCACCAAA
TCGACCGTGC CCGTTGGCAC CGGCGACGAG GTCGAGCGCA TCCTGCGCGA GGCCCGCCCC
GACATCGATG TCGGCGTCGC CTCGAACCCC GAGTTCCTGC GCGAGGGTGC CGCCATCGGC
GATTTCAAAC GGCCCGATCG CATCGTCATC GGCGCCGAGG ACAACCGCGC CGCCGCCGTG
ATGCAGGAGG TCTACCGCCC GCTCTACCTC AACGCCGCGC CGATCCTGCT CACCGGACGG
CGTACGGCCG AGCTGACCAA GTATGCCGCC AACGCGTTCC TGGCCACCAA GATCACCTTC
ATCAACGAGA TCGCCGATCT GTGCGAGCAG GTCGGGGCCA ACGTGCAGGA GGTCGCCCGC
GGCATCGGCC TCGACAACCG CATCGGCGGC AAGTTCCTGC ATGCGGGGCC GGGCTATGGC
GGCTCGTGCT TCCCCAAGGA TACGCTGGCC CTGGTGAAGA CGGCGCAGGA TTACGGCACG
CCGGTTCGGA TCGTCGAGAC GGTGGTGGCC GTCAACGATC AGAGGAAGCG CGCGATGGCG
CGCAAGGTGA TCGCGGCCTG CGGCGGGTCG GTGCGGGGCA AGCGGGTGGC GCTCCTGGGC
CTGACGTTCA AGCCGAACAC CGACGACATG CGCGACGCGC CCTCGCTGTC GATCATCGCC
GGCCTGCAGG ATGCGGGTGC ACAGATCGTG GCCTACGATC CCGAGGGGAT GGAGCAGGCG
CGACCGCTGC TTCACGGGGT CGCTTACGCC GAGGACGCCT ATGCCTGCGC CGAAGGCGCC
GACGCTCTGG TGATCGTGAC GGAGTGGAAC GCGTTCCGGG CGCTCGATCT CGCCCGGCTC
AAAGGGCTGA TGCGCGCCCC CGTCCTCGTC GATCTGCGCA ACGTCTACGC GCCCGCGGAG
ACCGAACGGC ACGGCTTCGC CTATTCCGGC ATCGGCGTTG CGTGA
 
Protein sequence
MRIAMIGSGY VGLVSGACLA DFGHEVVCID NDPGKIAALN EGRMPIYEPG LDALVAENVR 
AKRLTFSTDL KPAVAQAQAV FIAVGTPSRR GDGFADLSYV YAAAREIAEA LTGYTVVVTK
STVPVGTGDE VERILREARP DIDVGVASNP EFLREGAAIG DFKRPDRIVI GAEDNRAAAV
MQEVYRPLYL NAAPILLTGR RTAELTKYAA NAFLATKITF INEIADLCEQ VGANVQEVAR
GIGLDNRIGG KFLHAGPGYG GSCFPKDTLA LVKTAQDYGT PVRIVETVVA VNDQRKRAMA
RKVIAACGGS VRGKRVALLG LTFKPNTDDM RDAPSLSIIA GLQDAGAQIV AYDPEGMEQA
RPLLHGVAYA EDAYACAEGA DALVIVTEWN AFRALDLARL KGLMRAPVLV DLRNVYAPAE
TERHGFAYSG IGVA