| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1864 |
|---|
| Symbol | |
|---|
| ID | 5832647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2085744 |
|---|
| End bp | 2087033 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641367664 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001639334 |
|---|
| Protein GI | 163851291 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGC TGACGAAGCG CATCTTGGAT GCGGCAGGAG CCCGTCCGAC CCCATACTTC
CTCTGGTGCA GCGATCTGAA AGGGTTCGGT GTCCGCATCT TTCCGAGTGG GCGGCGGGTC
TACTACGCCG ACTATCGAAC CGCAGCCGGT ATGCGCAGAC GCATGTCGCT GGGCGAGCAC
GGCAAGCTCA CGGTAGACGA GGCGCGCCGA CTGGCCATCA CCACGCTCGG CGACGTGATC
CGCGGTGACG ATCCGATCGA GGAGCGTGTC ACTCGGCGTA AGTCGCTGAC GATCGCCGAA
CTGTGCCGAC GGTACCTTGA AGCAGCCGGA GCTGGCTTGG TGCTCGGCCG CGGCCGGAAG
CCGAAGAAGG CTACGACGCT GGTCTCCGAC CGCGGGCGTA TCGAACACCA CATCGTCCCG
CTGCTCGGCT CGCGATTGGT TCGTGATCTG ACCACGGCCG AGGTTCAGCG CTTCGTGCGC
GACGTCCAGG CTGGTCGGAC GGCCAAGAGG TACAAGACCA AGGCTCGTGG CATGGTCTTG
GTCGAGGGAG GCGCTGGCGC GGCAGCACGC ACGGCTGGCT TGCTTGGCGG CATAATGAGC
TACGCGATCG GGGAGGGCGT CATTGCCCTG AACCCAGTGC GTGGCGTGAA ACGGCCGGCC
GACAGGAAGA AGGACCGACG CCTCTCACCA GAGGAGTACC GCGCGCTCGG CCGGGTGCTC
GCCGAGGCGG AAGGGGACCG CGAGAGCTGG CAGGCCGTGA GCAGCATCCA GTTGCTCTGT
CTCACCGGAT GCCGCATGCG GGAGATCGCC AACCTGCGTT GGACCGAGGT AGATTTTGCC
GGTCGCTGCC TCCGCCTCGA CAATACGAAG GAAGGGCGCT CAATCCGGCC GCTCGGTCAA
GCCGCGGTCG CACTGCTCCG CCAGATCGAG GAGCGTCGCG CTGGTCCCTA CGTGTTGCCT
GCGACGCGCG GGGAGGGCGG GTTCGGCGGT ATCCCGGACG CAATCGAAAG ATACTCCAAA
CGCGCTGGCC TCCCAGGCAT TGGCGCTCAC ACCTTGCGCC ATTCATTCGC CTCCACCGCG
GCAGACCTTG GCTGCAGCGA CTCGACGATT GGAGCGATGC TCGGCCACGC CGGGCACGGT
GTAACCTCGC GGTACATCCA TCACCTCGAC GCAGTGCTGA TCATGGCGGC GGATCGAGTC
ACGACTGCGA TGGCAGGGTG GCTCAAGGAT CGATATGCAG AGAGGCTAGA GCCGGCCTAT
CCCGCCAGCA GGACTGTACC GCTTAGCTAG
|
|---|
| Protein sequence | MPKLTKRILD AAGARPTPYF LWCSDLKGFG VRIFPSGRRV YYADYRTAAG MRRRMSLGEH
GKLTVDEARR LAITTLGDVI RGDDPIEERV TRRKSLTIAE LCRRYLEAAG AGLVLGRGRK
PKKATTLVSD RGRIEHHIVP LLGSRLVRDL TTAEVQRFVR DVQAGRTAKR YKTKARGMVL
VEGGAGAAAR TAGLLGGIMS YAIGEGVIAL NPVRGVKRPA DRKKDRRLSP EEYRALGRVL
AEAEGDRESW QAVSSIQLLC LTGCRMREIA NLRWTEVDFA GRCLRLDNTK EGRSIRPLGQ
AAVALLRQIE ERRAGPYVLP ATRGEGGFGG IPDAIERYSK RAGLPGIGAH TLRHSFASTA
ADLGCSDSTI GAMLGHAGHG VTSRYIHHLD AVLIMAADRV TTAMAGWLKD RYAERLEPAY
PASRTVPLS
|
|---|
| |