Gene Mext_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1795 
Symbol 
ID5832996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2014645 
End bp2015853 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content68% 
IMG OID641367594 
ProductSerine--glyoxylate transaminase 
Protein accessionYP_001639265 
Protein GI163851222 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.758509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.307754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA CGAGACGTCC GGGACGCAAC CACCTGTTCG TTCCCGGCCC GACCAACATC 
CCGGACCGGG TGATGCGCGC CATGATGGTG CAGTCCGAGG ATCACCGCTC GGTCGATTTC
CCGTCGCTGA CGAAGCCGCT GTTCGAGGAC ACCAAGAAGG TGTTCGGCTC GACCGAAGGC
ACGATCTTCC TGTTCCCGGC CTCCGGCACG GGCATCTGGG AATCGGCGCT GTCCAACACG
CTCGCCCGCG GCGACAAGGT GCTGGCCGCC CGCTTCGGCC AGTTCAGCCA TCTCTGGATC
GACATGGCCC AGCGCCTCGG CCTGGACGTC GTCGTCCAGG AGGAGGAGTG GGGCACCGGC
GCCAAGCCCG AGAAGATCGA GGAGGCCCTG CGCGCCGACA AGAACCATGA GATCAAGGCC
GTCATGGTGG TCCATAACGA GACCGCGACC GGCGTGACCT CCAACATCGG CGCCGTGCGC
AAGGCGATCG ACGCCGCCGG CCACCCGGCC CTGCTGTTCG TCGACGGCGT GTCCTCCATC
GGCTCGCTGC CCTTCAAGGC CGACGAGTGG AAGGTCGACT GCGCCATCGC CGGCTCCCAG
AAGGGCCTGA TGCTGCCCGC CGGCCTCGGC GTGATCTGCG TCAGCCAGAG GGCGCTCAAG
GCCGCCGAGG GCCAGTCCGG CCGCAACGAC CGGCTCGCTC GCGTCTACTT CGACTGGGAA
GACCAGAAGA AGCAGAACCC GACCGGCTAT TTCCCCTACA CCCCGCCGCT GCCGCTGCTC
TACGGCCTGC GCGAGGCGCT CGCCTGCCTG TTCGAGGAAG GACTGGAGAA CGTCTACCAC
CGCCACGCCG TGCTCGGTGA GGCGACCCGT CAGGCCGTCG CGGCCTGGGG CCTGAAGACC
TGCGCCAAGT CGCCGGAGTG GAACTCCGAC ACCGTCACCG CCATCCTGGC GCCCGAGGGT
GTGGACGCGG CCAAGATCAT CAAGCACGCC TATGTGCGCT ACAACCTCGC GCTCGGCGCC
GGCCTGTCCC AGGTCGCGGG CAAGGTGTTC CGCATCGGTC ACGTCGGCGA CCTGAACGAA
CTCTCGCTGC TCGGCGCCAT CGCCGGTGCC GAGATGTCGC TCATCGACAA CGGCGTGAAG
GTGACCCCCG GTTCGGGTGT TGCGGCTGCC TCCAGCTACC TGCGCGAGAA CCCGCTCGCC
AAGGCCTGA
 
Protein sequence
MAATRRPGRN HLFVPGPTNI PDRVMRAMMV QSEDHRSVDF PSLTKPLFED TKKVFGSTEG 
TIFLFPASGT GIWESALSNT LARGDKVLAA RFGQFSHLWI DMAQRLGLDV VVQEEEWGTG
AKPEKIEEAL RADKNHEIKA VMVVHNETAT GVTSNIGAVR KAIDAAGHPA LLFVDGVSSI
GSLPFKADEW KVDCAIAGSQ KGLMLPAGLG VICVSQRALK AAEGQSGRND RLARVYFDWE
DQKKQNPTGY FPYTPPLPLL YGLREALACL FEEGLENVYH RHAVLGEATR QAVAAWGLKT
CAKSPEWNSD TVTAILAPEG VDAAKIIKHA YVRYNLALGA GLSQVAGKVF RIGHVGDLNE
LSLLGAIAGA EMSLIDNGVK VTPGSGVAAA SSYLRENPLA KA