| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1732 |
|---|
| Symbol | |
|---|
| ID | 5832235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1955532 |
|---|
| End bp | 1956440 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641367531 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001639202 |
|---|
| Protein GI | 163851159 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.244285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTA AGGCAGCGTC CTTTCCCCGC GGCCGGGCGC TGCCCGTGGC CGGCGTCGTC
CTGGCGCTTC TCGTTGGCTG GTACCTCGCC GCCCTGCTCG GCAACTGGAA CGGCGCCGCG
GACGCGCTCG TGCGGGCCGG CGCGACGCCC GACGCCGCGG GCATCGCTGC GGCGACGATG
GCGCAGGAGC GGCCCGTCGT GCCGGCACCG CATCAGGTGT TTTCGGAGTT GTCGCGCAGC
GTCCTCGGCG TGCCGCTGAG TTCGAAGCGC AGCCTCGTCT ATCACGCCTG GGTCACCCTC
TCGGCGACGC TCACCGGCTT CGCCCTCGGC TCGCTGCTCG GCATCGCGCT CGCGGTCGCG
ATCGTGCACC TGCGCAGCGT CGAGGCGAGC CTGATGCCCT GGATCGTCGC CTCGCAGACC
GTGCCGATCC TGGCCGTGGC GCCGATCATC ATCGTGGCGC TCGGCGCGGC CGGCCTGACC
GGCCTGCTGC CGAAGGCGGT GATCGCGGCC TATCTCTGCT TCTTCCCCGT CACGGTCGGC
ATGGTGAAGG GGCTGAACGC CCCCGACCGG ATCCAGCGCG ACTTGATGCG GACCTACTCG
GCCTCGCGCG GGCAAATCCT GGCGCGGCTG CGCTGGCCGG CCGCCCTGCC CTACCTGTTC
GCGAGCCTGA AGATCGCGGT GGCGGCGAGC CTCGTCGGCA CCATCGTCGC CGAATTGCCG
ACCGGGGCGC AGGCCGGGCT CGGGGCGCGG CTGCTCGCCG GCTCCTATTA CGGCCAGACG
ATCCAGATCT GGGCGGCCCT GTTCGCGGCG GCGGCGCTCT CGGCGCTCCT CGTCCAGGGG
ATCGGCCTCG CGGAACGTGC GAGCGCCCGC GCCCTCGGCG CCCGGCCCGC AGCAGGAAGT
GCCCGATGA
|
|---|
| Protein sequence | MTRKAASFPR GRALPVAGVV LALLVGWYLA ALLGNWNGAA DALVRAGATP DAAGIAAATM
AQERPVVPAP HQVFSELSRS VLGVPLSSKR SLVYHAWVTL SATLTGFALG SLLGIALAVA
IVHLRSVEAS LMPWIVASQT VPILAVAPII IVALGAAGLT GLLPKAVIAA YLCFFPVTVG
MVKGLNAPDR IQRDLMRTYS ASRGQILARL RWPAALPYLF ASLKIAVAAS LVGTIVAELP
TGAQAGLGAR LLAGSYYGQT IQIWAALFAA AALSALLVQG IGLAERASAR ALGARPAAGS
AR
|
|---|
| |