| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1689 |
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| Symbol | |
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| ID | 5831897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1902857 |
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| End bp | 1904581 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641367488 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001639159 |
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| Protein GI | 163851116 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.557347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCG TTGCGATGGA GCTCGGGACG GTCAATCAAC GTCAAGCGAG CGGTCCAGGA
AAGCGTCGCC TGAGCGTTCA GATTGGCTTG GTATCGCTGA TGGTGACCAC GGCCCTGTCG
GGGTTCTTCT TCACTAACGC GCATCAGCAG GCACTGATCG ATCTGCGCGA GGGCGGACGT
CAGATGCGTA TCGCGCAGGA AGCGCTGATG GACGCGGAGT CCTATGTCCT GAACAAGGCA
CTGGGGACTG GCGATGGCCA GTTCGGAGCG TTCAACCGCG CCCTCGAGGC GCTGCACAGC
CGGCGCACCG CGCAGCTCGC CCTACTGACT CCCTTCATTG GGAGATCGGA CGGCAATGCT
ACGGCGGGAG GCATTCTCGA ATCGCTTGAG GCGAGTTGGA CCGAGGTGCT CGAGCTCGCG
CGGTCGGGAC GTCTCACCGA GGCGCAGGCG CTACTCAGGG AGCGCCATAG TGCTGCTCAG
GTCGGTAGGA TTCGAAGTGC CTTCGACGCG TTCCTGACCG ACTGGAACGC GCACTTCGCT
GTGCACGAGA CCCGCATCGA GATCGGCAAG CTTTTCGTTC TGCTCTCGCA GCTCCTGATC
GGCGGAGTGA TGGTTTTCGC CTTCCGGTCT GCGGCACGCG ATGCTCAAGC GCGGCAGGCC
GCCATTACGC AGGTGGAGGC CTCTCGTAAG CAGGTCGGCC ACTTGTTCGG GATGACCGAC
ATGCTGCAGA GCGCGGCGGA TCACCACGAC GCTAACGCGG TTCTGAGAGC CACCGCCGGA
GAACTCATCG CTGGCTTCGG TGGTGCCCTT TACGTCTTCA ACAACTCGCG TGATCGTCTG
GTGCTCTCCA CCTCTTGGGC ATGCAGTGAC GGTGCGTCCC TCCCGGAAGC CATCATGGTC
GGCCAGTGCT GGGCGATGAA GCGCGGCAAG CCGCACATCA ACCATCGAGG GGCGAAAGCT
CTCTGCTGCG AGCACCATGT CTCTGGCATG GCAGCCTTGG AGATCCCGAT GGCGGCGCGC
GGCGAAAACC TCGGACTCCT GCAGATCTTC GCGGAGGGGA CCGACGCGGA GACACGCTTG
GCCGCGATGC TGCCGCTCAG CTCCGCGCTC GGCGATGCGA TGTCACTTGC GCTCTCAAAC
ATCGCTCTTC GTGAGAAGCT GCGCAATCAA GCCCTTCGCG ATCCACTGAC TGGGCTCTAC
AATCGTCGTT ACATGGAGGA CAGTCTTGAG CGTTACGTTC GGCTCGCCGA ACGGGAAGGC
CGGAAAGTTT CCGTCATCAT GATCGATCTC GACCACTTCA AACGACTGAA CGACGAGCAC
GGTCATGCGA TTGGCGACGC GGTCCTGTGT GAAGCCGCCG CCGCCATCGT GGGCGCCTTG
CGGGAGACAG ATGTGGCCTG CCGGTATGGC GGCGAGGAGA TGATCGTGTT CCTGCCCGAT
TGCGATCTCG AGGACGCGGC AGCCAAGGCC GAGCAGATCC GAGGCCGTAT CGAGAGCCTA
TCCGGCACGC ATGGGGCAAA GGTCTCTGCC TCACTCGGTG TCGCCTCTGT CCCGAGCACC
TCGGGCACCA GTGCCGAACT GATACGCGCT GCGGATACGG CACTTTACCG GGCCAAGCAC
AACGGCCGGA ACCAAGTGGC CGTGGCGCCG CTGCGTCAAG GATGGCGGAG CCGATCCGAG
GCAGCGCCGG ATGAGCCTGT GCTGCTACCG ATCGCGGCAG AGTAG
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| Protein sequence | MSLVAMELGT VNQRQASGPG KRRLSVQIGL VSLMVTTALS GFFFTNAHQQ ALIDLREGGR
QMRIAQEALM DAESYVLNKA LGTGDGQFGA FNRALEALHS RRTAQLALLT PFIGRSDGNA
TAGGILESLE ASWTEVLELA RSGRLTEAQA LLRERHSAAQ VGRIRSAFDA FLTDWNAHFA
VHETRIEIGK LFVLLSQLLI GGVMVFAFRS AARDAQARQA AITQVEASRK QVGHLFGMTD
MLQSAADHHD ANAVLRATAG ELIAGFGGAL YVFNNSRDRL VLSTSWACSD GASLPEAIMV
GQCWAMKRGK PHINHRGAKA LCCEHHVSGM AALEIPMAAR GENLGLLQIF AEGTDAETRL
AAMLPLSSAL GDAMSLALSN IALREKLRNQ ALRDPLTGLY NRRYMEDSLE RYVRLAEREG
RKVSVIMIDL DHFKRLNDEH GHAIGDAVLC EAAAAIVGAL RETDVACRYG GEEMIVFLPD
CDLEDAAAKA EQIRGRIESL SGTHGAKVSA SLGVASVPST SGTSAELIRA ADTALYRAKH
NGRNQVAVAP LRQGWRSRSE AAPDEPVLLP IAAE
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