Gene Mext_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1648 
Symbol 
ID5832618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1841237 
End bp1842640 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content67% 
IMG OID641367446 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001639118 
Protein GI163851075 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG ATCTCATCGT CATCGGCACC GGCCCCGGCG GCTATGTCTG CGCCATCCGC 
GCGGCCCAGC TCGGGCTGAA GACCGCGGTG GTCGAGAAGC GGGCGACCCA CGGCGGCACC
TGCCTCAATG TCGGCTGCAT CCCGTCCAAA GCGCTGCTGC ACGCATCGGA AGCCTTCGAG
GAGGCCAACA AGCACTTTTC GGAGTTGGGC ATCGACGTGG GTACGCCGAA GCTTGATCTC
AAAAAAATGC AGAGCTTCAA GCAGAGTGGC GTCGACGGCA ACACCAAGGG CGTCGAGTTC
CTGCTCAAGA AGAACAAGGT CGATACCTAT CACGGCCGCG GCCGCATCGC CGGGGCCGGC
CGTGTCGAGG TGATCTCGGA CGACGGCGGC AACCAGTTGC TGGAGACGAA GAACATCGTC
ATCGCCACCG GTTCCGACGT GACCCGGCTG CCCGGCGTCG AGATCGACGA GAAGACGGTG
GTCTCCTCCA CCGGCGCGCT CGAACTCGCC GAGGTGCCCA AGCGCCTCGT GGTGATCGGC
GCGGGCGTGA TCGGGCTCGA ACTCGGCTCG GTCTGGCGCC GCCTCGGCGC CGAGGTCACC
GTGATCGAGT ATCTCGACCG GGTGTTGCCG GGCATGGACG GCGAGGTCGG CAAGCAGTTC
CAGCGCATCC TGGCCAAGCA GGGCATGGTC TTCAAGCTCT CGACCAAGGT GACCGGTGTC
GAGACCGGCA AGAAGGGCCG CGCCACCGTC ACGGTCGAGC CGGCGCAGGG CGGCGAGCCG
GAGAAGCTCG AGGCCGACGT GGTGCTCGTG GCCATCGGCC GGGTGCCCTA CACGGAAGGG
CTCGGGCTCG AGACGGTGGG CGTGGCGACC GACGACAAGG GCCGGATCGA GGTCGATTCG
CACTACGCCA CCAACGTCAC CGGCATCTAC GCCATCGGCG ACGTGATCGC CGGGCCGATG
CTCGCCCACA AGGCGGAGGA CGAGGGCGTC GCGGTCGCCG AGATCCTGGC CGGCCAGTCG
GGCCACGTGA ATTACGGCGT GATCCCGAAC GTGGTCTACA CCTTTCCCGA GGTCGCCTCG
GTCGGCAAGA CCGAGGAGGA GCTGAAGAAG GACGGGATCG CCTACAACGT CGGCAAGTTC
CCCTTCACCG CCAACGGCCG GGCCAAGGCC AACGGCACCA CCGACGGCTT CGTGAAGATC
CTCGCGGACG CGCAGAGCGA CCGGGTGCTC GGCGTGCACA TCGTCGGGGC GGATGCCGGC
AACCTCATCG CCGAGGTCGC GGTGGCGATG GAGTTCGCAG CCTCCGCCGA GGACATCGCC
CGCACCTGCC ACGCCCACCC GACGCTGACC GAGGCGATCA AGGAAGCCGC GCTCGCCGTC
GACAAGCGCG CGATTCACGT CTGA
 
Protein sequence
MSYDLIVIGT GPGGYVCAIR AAQLGLKTAV VEKRATHGGT CLNVGCIPSK ALLHASEAFE 
EANKHFSELG IDVGTPKLDL KKMQSFKQSG VDGNTKGVEF LLKKNKVDTY HGRGRIAGAG
RVEVISDDGG NQLLETKNIV IATGSDVTRL PGVEIDEKTV VSSTGALELA EVPKRLVVIG
AGVIGLELGS VWRRLGAEVT VIEYLDRVLP GMDGEVGKQF QRILAKQGMV FKLSTKVTGV
ETGKKGRATV TVEPAQGGEP EKLEADVVLV AIGRVPYTEG LGLETVGVAT DDKGRIEVDS
HYATNVTGIY AIGDVIAGPM LAHKAEDEGV AVAEILAGQS GHVNYGVIPN VVYTFPEVAS
VGKTEEELKK DGIAYNVGKF PFTANGRAKA NGTTDGFVKI LADAQSDRVL GVHIVGADAG
NLIAEVAVAM EFAASAEDIA RTCHAHPTLT EAIKEAALAV DKRAIHV