| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1640 |
|---|
| Symbol | |
|---|
| ID | 5832581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1828721 |
|---|
| End bp | 1829998 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641367438 |
|---|
| Product | radical SAM protein |
|---|
| Protein accession | YP_001639110 |
|---|
| Protein GI | 163851067 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.100638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.136917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGG CGTCGTTCGA CTCCGCCCCG GGCGCATCGC GCGCCCTCCC CGCAATCGAG
AAGGCCCCCG AGGTCACGGC CCTCTCGACC CTGCCCGGCC GCAAGGCCTC CCTCGTCGGC
CTCACCCGCG AGGGCCTGAA GCAGGCGCTC ATCGGCATCG GCGTGCCCGA GCGCGAGACG
CGGATGCGGG TGAGCCAGGT CTGGCACTGG ATCTACGTGC GCGGCGCGCG CGAATTTTCC
GAGATGACCA ATGTCGGCAA GGGCCTGAAG GCGCAGCTTG CCGACCACTT CACTCTGGAG
CGTCCGGAGG TCGTCACCGA GCAGGTTTCT CGCGACGGCA CCCGCAAATG GCTCCTGCGC
ATGGCGCCCA CCGGCGCGCA CGACCACAAC CGCGGCGCCG AGATCGAGTG CGTCTACATC
CCCGGCGACG ACCGCGGCAC GCTCTGCGTC TCGTCCCAGG TCGGCTGCAC GCTCACCTGC
TCGTTCTGCC ATACCGGCAC GCAACGCCTC GTGCGTAACC TCTCGACGGC GGAGATCGTC
GCGCAGCTCG TCGTCGCCCG CGACGCGCTC GGCGACTTCA CCGGCCAGAT GCCGGGCAAG
GATGGCGGCG AGCCCGGTCG GCTGGTCACC AACATCGTGT TCATGGGCAT GGGCGAGCCG
CTCTACAATC TCGACGCGGT GATCGATGCC ATCGCGGTGA TGTCGGACCA GGAAGGCCTC
GCGCTCTCGC GGCGGCGCAT CACGGTCTCG ACCTCCGGCG TGGTGCCGCA GATGGAGCGG
CTGGGGCTGG AAGCCAACGC CATGCTGGCG ATCTCGCTGC ACGCGGTGCG CGACGAGCTG
CGCGACGAGC TGGTGCCGCT GAACCGCAAA TACCCGATCG CCCAGTTGCT CGACGCCTGC
CGGAACTATC CGGGGCTGAG CAACGCCCGG CGCATCACCT TCGAGTACGT GATGCTCAAG
GGCGTCAATG ATTCGGACGC CGATGCCCGC GCCCTGGTGC GGCTGCTCAA GGGCATCCCG
GCCAAGATCA ACCTGATCCC GTTCAACCCC TGGCCCGGCT CGAAATACGA GTGCTCGGAC
TGGGAGCGGA TCGAGCGCTT CTCCGAGATC GTCTTCACCG CCGGCTACGC CTCGCCGGTG
CGCACCCCGC GCGGGCGCGA CATCCTGGCA GCCTGCGGCC AGCTCAAGAG TGAGACCGAG
AAGCTGCGCG CCCGCGCCCG GTTGATGCTC GAAGAGGGCA TGGGCGCCGA GGCCGTCTAC
GCCGATCAGG TCGACTGA
|
|---|
| Protein sequence | MATASFDSAP GASRALPAIE KAPEVTALST LPGRKASLVG LTREGLKQAL IGIGVPERET
RMRVSQVWHW IYVRGAREFS EMTNVGKGLK AQLADHFTLE RPEVVTEQVS RDGTRKWLLR
MAPTGAHDHN RGAEIECVYI PGDDRGTLCV SSQVGCTLTC SFCHTGTQRL VRNLSTAEIV
AQLVVARDAL GDFTGQMPGK DGGEPGRLVT NIVFMGMGEP LYNLDAVIDA IAVMSDQEGL
ALSRRRITVS TSGVVPQMER LGLEANAMLA ISLHAVRDEL RDELVPLNRK YPIAQLLDAC
RNYPGLSNAR RITFEYVMLK GVNDSDADAR ALVRLLKGIP AKINLIPFNP WPGSKYECSD
WERIERFSEI VFTAGYASPV RTPRGRDILA ACGQLKSETE KLRARARLML EEGMGAEAVY
ADQVD
|
|---|
| |