| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1633 |
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| Symbol | |
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| ID | 5835115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1820957 |
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| End bp | 1822168 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641367431 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001639103 |
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| Protein GI | 163851060 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.73321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.191724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGAGGAG CCGTCCTTCC CCGAGCCATC TTTCCCGAGC CACCGGTGCC GCCCTTGTCC
GACCATTCCC CCCTCGCCCT CGCCCAGGCG CTGATCCGCT GCCCCTCCGT GACTCCGGAG
GAGGGAGGGG CTCTGTCGTT CCTGGCGGAT CGTCTTTCGC GGGCGGGCTT CTCGGTCGAG
CGTCCGGTCT TCTCCGAGCC CGGCACGCCG GACATCCAGA ACCTCTACGC CCGGATCGGC
ACCGCAGGGC CGGTCCTTGT CTTTGCCGGC CATACCGACG TGGTGCCGCC GGGCGAAGTC
GGCTCCTGGA CCCACGGGCC GTTCTCGGGC GAAGTCGCCG AGGGCTTCCT CTACGGGCGC
GGCGCGGTGG ACATGAAGGG CGGCATCGCC TGCATGCTCG CCGCGACGCT CGCCTTCCTC
GATCGGCACG GGCCGGATTT CGGCGGCTCC ATCGCCTTCC TCGTCACCGG CGACGAGGAG
GGGCCGGCGG TCAACGGCAC CGTGAAGCTG CTCGATTGGG CGAAGGCGAG GGGCGAGCGC
TTCGACCATT GCCTGCTCGG CGAGCCGACC AACCCCGACA CCCTCGGCGA GATGATCAAG
ATCGGCCGGC GCGGCTCGCT GACCGGGCGC ATCACCGTGC ACGGCCGCCA GGGCCACGTC
GCCTATCCGC ACCGGGCCGA GAACCCGATT CCCGGCCTGC TTCGCCTCGC CTCGGCGCTG
ACCGCCGACC CCCTCGACGG CGGCACCGCG CATTTCGACG CGTCGAACCT CGAATTCACG
ACGATCGATG TCGGCAACCC GGCCACCAAC GTGATCCCGG CCTCGGCCAA GGCCGTGTTT
AACGTGCGCT TCAACGATGA CTGGACGGCG GACACCCTCG GTGCCGAGAT CCGGCGGCGG
CTGGAGGCGG CGGCCGGCAA CGCGGTGCGG TTCAGCCTCG ACCTTCAGCC CTCGAACTCG
CCCGCCTTCC TGACGCAGCC CGACGCCTTC GTCGATCGGG TGGCCGATGC GATTGAGGCC
GAGACCGGCC GGCGCCCGGC GCTCTCCACC ACGGGGGGCA CCTCGGACGC CCGCTTCATC
AAGGATGCCT GCCCGGTGAT CGAGTTCGGC CTCGTCGGAC GGACCATGCA CGAGACCGAC
GAGCGGGTGG CGGTAGCGGA TCTCGACCGG CTCACCGCGA TCTACGGGCG GGTGCTGGAC
GCTTACTTCT GA
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| Protein sequence | MGGAVLPRAI FPEPPVPPLS DHSPLALAQA LIRCPSVTPE EGGALSFLAD RLSRAGFSVE
RPVFSEPGTP DIQNLYARIG TAGPVLVFAG HTDVVPPGEV GSWTHGPFSG EVAEGFLYGR
GAVDMKGGIA CMLAATLAFL DRHGPDFGGS IAFLVTGDEE GPAVNGTVKL LDWAKARGER
FDHCLLGEPT NPDTLGEMIK IGRRGSLTGR ITVHGRQGHV AYPHRAENPI PGLLRLASAL
TADPLDGGTA HFDASNLEFT TIDVGNPATN VIPASAKAVF NVRFNDDWTA DTLGAEIRRR
LEAAAGNAVR FSLDLQPSNS PAFLTQPDAF VDRVADAIEA ETGRRPALST TGGTSDARFI
KDACPVIEFG LVGRTMHETD ERVAVADLDR LTAIYGRVLD AYF
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