| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1610 |
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| Symbol | |
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| ID | 5834179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1798088 |
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| End bp | 1799980 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641367408 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001639080 |
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| Protein GI | 163851037 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0307755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0806317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CCGTCCGTCC CAAAGATCTT CCCAACAGCA ATCCCGCCAG CGTGACCACC
GGCCCCGTGC AGGGCTCGCG CAAGGTCTAT GCGGAGGCGC CCGGCCGCCC CGACATTCGC
GTGCCCTACC GGGAGATCGC CCTCTCCGAC CCGAAGGAGG AGCCGGTGCG GGTCTACGAC
CCGTCGGGCC CCTACACCGA GACCGATGCG GCCATCGACC TCGAGAAGGG TCTGGCCCCG
GTCCGCGAGC CGTGGATCGT CGGGCGCGGC TACGCCGCCG TGAAGCCGCG CGAGGTGAAG
CCGGAGGACA ACGGATTCGC GGCTGCCGAC AAGCTCGTGG CGCCATGCCC CGCCGAGCGG
ACGATCCGCC GGGCCGAGCC GGGGCAGTTG GTGACGCAGT ACGAATTCGC CCGCGCCGGG
ATCATCACGG AAGAGATGAT CTATGTGGCG CATCGCGAGA ACGCCTGCCG CGCGCAGATG
CTGGAGCGGG CGCAAGCCGC GCTCGCCGAC GGCGACAGTT TCGGCGCAGC GGTGCCGCCC
TTTATCACGC CCGAATTCGT CCGCGACGAG GTGGCCCGCG GGCGTGCCAT CATCCCGGCC
AACATCAACC ACCTCGAACT CGAGCCGATG GCGATCGGCC GCAATTTTTT GGTGAAAATC
AACGCCAATA TCGGCAACTC GGCGGTGACG TCTTCCGCGG CTGAGGAAGT CGAAAAACTG
GTCTGGTCGA TCCGCTGGGG TGCGGACACG GTCATGGACC TCTCGACGGG CCGCAACATC
CACAACATCC GCTCGTGGAT CGTGCGCAAC TCGCCCGTCC CGATCGGCAC CGTGCCGATC
TATCAGGCGC TGGAAAAGGT CGGCGGCGAC CCGCTGAAGC TCGATTGGGA GGTGTTCAAG
GACACGCTCA TCGAACAGGC CGAGCAGGGC ATCGACTACT TCACGATCCA TGCCGGCGTG
CGGCTGGCCC ATGTGCCGCT GACCGCGCGG CGCACCACCG GCATCGTGTC GCGCGGCGGC
TCGATCATGG CGCGCTGGTG CCTCGCCGGG CACCGCGAAT CGTTCCTCTA CGAGCGGTTC
GACGAGATCT GCGACATCAT GCGGGCCTAC GACGTGTCGT TCTCGCTCGG CGACGGCCTG
CGTCCCGGCT CGATTGCGGA TGCCAACGAC GCGGCCCAGT TCGCCGAACT GGAGACCCTG
GGCGAACTCA CCAAGATCGC CTGGGACAAG GGCTGCCAGA CCATGATCGA GGGCCCCGGC
CACGTGCCGA TGCACAAGAT CAAGGTCAAC ATGGAGAAGC AGCTGCGCGA GTGCGGCGAG
GCGCCGTTCT ACACCCTCGG CCCGCTGACC ACCGACATCG CGCCGGGCTA CGACCATATC
ACCTCGGGCA TCGGCGCGGC GATGATCGGC TGGTTCGGCA CGGCGATGCT CTGCTACGTC
ACGCCGAAGG AGCATCTCGG GCTGCCGAAC CGCGACGACG TGAAGACCGG CGTCATCACC
TACAAGATCG CCGCGCACGC CGCCGACCTC GCCAAGGGCC ACCCCGCCGC GCAGCTCCGC
GACGACGCCC TCAGCCGCGC CCGGTTCGAC TTCCGCTGGG AGGACCAGTT CAACCTCTCG
CTGGATCCCG ACACGGCGCG CGCCTACCAC GACGAGACCC TGCCGAAGGA CGCGCACAAG
GTCGCCCATT TCTGCTCGAT GTGCGGCCCG AAATTCTGCT CGATGAAGAT CACGCAGGAT
CTGCGCGCCG ACGTGCTCGC CATGGAAGAG GCCGGCATCG TCATCGGCCA AGCCCAGCCG
ATGAGCGACG CCGAGCGCCA GGCCGGCATG GCGGCCAAGT CGCAGGAGTT CCTGGAAGAG
GGCGGCAAGC TCTACGTCGA CGCGGCGGAG TAA
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| Protein sequence | MNAPVRPKDL PNSNPASVTT GPVQGSRKVY AEAPGRPDIR VPYREIALSD PKEEPVRVYD
PSGPYTETDA AIDLEKGLAP VREPWIVGRG YAAVKPREVK PEDNGFAAAD KLVAPCPAER
TIRRAEPGQL VTQYEFARAG IITEEMIYVA HRENACRAQM LERAQAALAD GDSFGAAVPP
FITPEFVRDE VARGRAIIPA NINHLELEPM AIGRNFLVKI NANIGNSAVT SSAAEEVEKL
VWSIRWGADT VMDLSTGRNI HNIRSWIVRN SPVPIGTVPI YQALEKVGGD PLKLDWEVFK
DTLIEQAEQG IDYFTIHAGV RLAHVPLTAR RTTGIVSRGG SIMARWCLAG HRESFLYERF
DEICDIMRAY DVSFSLGDGL RPGSIADAND AAQFAELETL GELTKIAWDK GCQTMIEGPG
HVPMHKIKVN MEKQLRECGE APFYTLGPLT TDIAPGYDHI TSGIGAAMIG WFGTAMLCYV
TPKEHLGLPN RDDVKTGVIT YKIAAHAADL AKGHPAAQLR DDALSRARFD FRWEDQFNLS
LDPDTARAYH DETLPKDAHK VAHFCSMCGP KFCSMKITQD LRADVLAMEE AGIVIGQAQP
MSDAERQAGM AAKSQEFLEE GGKLYVDAAE
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