| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1563 |
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| Symbol | rho |
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| ID | 5833431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1743257 |
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| End bp | 1744777 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641367361 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001639033 |
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| Protein GI | 163850990 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.657404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCC ATTGCAGCCG TGTCGCATTC CGAGGTCTTT CTGGCCGAGC GGAACCGATG
CGCGGGCCGG GCCGCGCGCC CGCGACGGCT ACGGACCCCG GGGCGCTTCC CCAGCGCCCG
GCTCTGCTCC CGAACCGGCC GACCATTCCC CGCCCTTCGT TGGTTGCATC TCCCCACATG
ACGTCACAGA ACGACGCTCT CACCCCCGTT GAAGCTCCGG CCGAAGCCGT CGTCGCGCCG
GCCGATCTCG TCGCCCGGCG TGAGGTGAAG CTTCAGGACC TCAAGTCCAA AACGCCGACC
GAGCTCACGG CCTTCGCGGA GGAGGTCGGT GTCGAGAACG CCTCGACCAT GCGCAAGCAA
GAGCTGATGT TTGCGATCCT CAAGCAACTC GCGGCCAACG AGACCGAGAT CATCGGCGCC
GGCACGGTCG AGGTGCTCCA GGACGGGTTC GGCTTCCTGC GCTCGCACGA TTCGAACTAT
CTGCCGGGTC CGGACGACAT CTACATCTCG CCGACCCAGA TCCGCCGCTT CGGCCTACGC
ACCGGCGACA CCGTCGAGGG CCCGATCCGC GGCCCCAAGG ACGGCGAGCG CTATTTCGCG
CTGCTCAAGG TCAACACGAT CAACTTCGAG AACCCGGAGA AGATCAAGCA CAAGGTCCAC
TTCGACAACC TGACGCCGCT GTTCCCGACG CAGCGCTTCA AGCTCGAACT CGACAACCCG
CCGAAAAAAG ATTTCAGCCC GCGGATCATC GACATCGTCT CGCCGATCGG CAAGGGCCAG
CGCGCGCTGA TCGTTGCGCC GCCGCGCACC GGCAAGACCG TGCTGATGCA GAACATCGCG
CAGTCGATCA CGATCAACCA TCCCGAATGC TACCTCATCG TGCTGCTCAT CGACGAGCGC
CCGGAAGAGG TGACCGACAT GATCCGCTCG GTAAAGGGCG AGGTCATCGC CTCGACCTTC
GACGAGCCGG CCACCCGCCA CGTGCAGGTC GCCGAGATGG TGATCGAGAA GGCCAAGCGC
CTGGTCGAGC ACGGCCGCGA CGTCGTGATC CTCCTCGACT CCATCACCCG CCTCGGCCGC
GCCTACAACA CGGTCGTGCC GTCCTCCGGC AAGGTGCTGA CCGGCGGTGT CGATGCCAAC
GCCCTGCAGC GGCCCAAGCG CTTCTTCGGC GCCGCCCGCA ACATCGAGGA GGGCGGCTCG
CTCTCCATCA TCGCGACCGC GCTGATCGAC ACCGGTTCGC GCATGGACGA GGTGATCTTC
GAGGAGTTCA AGGGCACCGG CAACTCCGAG ATCATTCTCG ACCGCAAGGT CTCCGACAAG
CGCATCTTCC CGGCCATCGA CATCACCCGC TCCGGCACCC GTAAGGAAGA GCTGCTGGTG
CCGCCGGACG CGCTCAAGAA GACCTACGTC CTGCGCCGCA TCCTCAACCC GATGGGCGTC
ACCGACGCGA TCGAGTTCCT CATGGACAAG CTGCGCCAGA CGAAGAGCAA CGGCGACTTC
TTCGACTCGA TGAACACCTA A
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| Protein sequence | MLSHCSRVAF RGLSGRAEPM RGPGRAPATA TDPGALPQRP ALLPNRPTIP RPSLVASPHM
TSQNDALTPV EAPAEAVVAP ADLVARREVK LQDLKSKTPT ELTAFAEEVG VENASTMRKQ
ELMFAILKQL AANETEIIGA GTVEVLQDGF GFLRSHDSNY LPGPDDIYIS PTQIRRFGLR
TGDTVEGPIR GPKDGERYFA LLKVNTINFE NPEKIKHKVH FDNLTPLFPT QRFKLELDNP
PKKDFSPRII DIVSPIGKGQ RALIVAPPRT GKTVLMQNIA QSITINHPEC YLIVLLIDER
PEEVTDMIRS VKGEVIASTF DEPATRHVQV AEMVIEKAKR LVEHGRDVVI LLDSITRLGR
AYNTVVPSSG KVLTGGVDAN ALQRPKRFFG AARNIEEGGS LSIIATALID TGSRMDEVIF
EEFKGTGNSE IILDRKVSDK RIFPAIDITR SGTRKEELLV PPDALKKTYV LRRILNPMGV
TDAIEFLMDK LRQTKSNGDF FDSMNT
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