Gene Mext_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1535 
Symbol 
ID5831972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1714861 
End bp1715880 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content75% 
IMG OID641367333 
Producturea amidolyase related protein 
Protein accessionYP_001639005 
Protein GI163850962 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0888352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC ACCTCCACAT CACCCGCCTC ACCGGCGCGG CCTCGCTTCA GGATGGCGGA 
CGGCGCGGCT TTCTCCGCTT CGGGCTTTCG GCCTCCGGGC CGATGGACCC GCTCGCCTTC
GCCGCCGCCA ACCGCCTCGT CGGCAACCCG GCCGATGCGG CGGCGCTCGA ACTCGGGCTG
GCCGGGGCGA GCCTGCGCGT CGCGGGCGGG GCGGTGCGCC TCGCGCTGGC GGGGGCGCCG
AGCGGGCTGC GCCTCGATGG CGAGCCGCTC GCCGCGCACC GCTCCTTCGT CCTGCGCGAG
GGCTCGGCGT TGACGATCGA GCGGCCGCGC GAGGGCGTGT TCGCCTATCT CGCGGCGGCC
GGCGGCTTTC CCGTCCGCCG CGTGATGGGC AGCCGGGCGC TCCACCAGCG CGCGGCACTC
GGCGGCCTTG ATGGGCGCGC ATGCCGCGAG GGCGATCGCC TGCCGCTCGC CGCCCCGGCC
TCGGGTGAAG CGGACCACAG CCTCGATCCG ATCCCGCTGG AACGCGAGGC GCCGGTCCGC
GTCGTCCTCG GGCCGCAGGA CGACCTGTTC CCGCAAGCCG GCCTCGCGAC GTTCTTGGCC
GAGACCTTCA CGGTGTCGAA CCGGGCCGAC CGGATGGGCT ATCAGCTCGA CGGACCGGAG
ATCGCCCATG GCGCGGGCGG CTTCAACATC GTCTCCGACG CCACCGTGGC CGGCTCGGTG
CAGGTGCCGG GTTCGGGCCG TCCCATCGTC CTGCTCGCCG ACCGCCAGAC GACCGGCGGT
TATCCGAAGA TCGCCACCGT GATCTCCGCC GACCTCAGGC GGATCGCCCA GCGCCGGCCG
GGCGAGCCGG TGCGGTTCGG GGCGGTCGAT CTCGCCACCG CCACCCGGCT TGCCCGCGAG
GCGGCGGTGC GGATCGCGGC CCTGGGCACC CGCCTCCGGC CGGTCGAGGG CGAGGTCGAG
CGGCTGATGG CGGCCAACCT CGCGGGCGCA GCGGTGGACG CTTTGCGCGC GGAGGATTGA
 
Protein sequence
MSAHLHITRL TGAASLQDGG RRGFLRFGLS ASGPMDPLAF AAANRLVGNP ADAAALELGL 
AGASLRVAGG AVRLALAGAP SGLRLDGEPL AAHRSFVLRE GSALTIERPR EGVFAYLAAA
GGFPVRRVMG SRALHQRAAL GGLDGRACRE GDRLPLAAPA SGEADHSLDP IPLEREAPVR
VVLGPQDDLF PQAGLATFLA ETFTVSNRAD RMGYQLDGPE IAHGAGGFNI VSDATVAGSV
QVPGSGRPIV LLADRQTTGG YPKIATVISA DLRRIAQRRP GEPVRFGAVD LATATRLARE
AAVRIAALGT RLRPVEGEVE RLMAANLAGA AVDALRAED