| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1525 |
|---|
| Symbol | |
|---|
| ID | 5833714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1703654 |
|---|
| End bp | 1704979 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641367323 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001638995 |
|---|
| Protein GI | 163850952 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase
[COG4923] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.103483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATGCT GGGTGGCGGG GCTGGATGGG TGCCGTGGGG CCTGGGCGGG CGCCCTGATC
GATCTCGACG ATCCGGCACG CTGGCGCTGC GCCCGCTTCC CGCGGGTGAT CGACCTGCTC
GACGGGCCGG AGGCTCCGGT CTGCGTCGGC ATCGACGTGC CGATCGGCCT GCCCGACCGG
GTGAGCGGGG GACGCTCGGC CGACCGGGCG GCGCGGGCGT TTCTCGGGGC GGGGCGTTCC
AGCGTCTTCC CGGTGCCGCC CCGCGCGGCG GTCTATGCCG GGAGCTACGA CGAGGCGAAG
GTCCTGTCGC GGGCGCATTC CGAGCCTCCC TTCGCGCCCT CGATCCAGTG CTGGAACATT
CTGCGCTACG TGCGGGAAGC CGACGAACTC CTGCGCGCGC GGTCCGATCT CGTGACGCGC
CTGCACGAGG TGCATCCGGA GGTCGCCTTC TTCCGCCTCA ATGGCGAGCA GCGTCTCTCA
GCCGGCAAGA AGGGCCCGGC CCGTGCCGAG GGTCTTGCCG CGCGCCGGGC CCTCCTGATC
GCCGCCGGGC TGCCCGCGGC GATGGTCGGT TCGCCGCCGC CGCCGGGTGT CGCTGCCGAC
GACCATCTCG ACGCCATGGC CGCCCTCGTC GTCGCCCGCG ACATCGCCGA GGGCCGCGCC
GAGCCGCTTC CCAACGCGAT CGAGTGCGAC AGCTATGGCC TGCCGATCGT GATCTGGGCG
CCCGCGCCCC TTCCTGCGCC GCTTCCGATG CCCTTTCCCG CGCCCTTTGA CCGCGCCCCT
TGCCACGAGG AGTTGAGCCC CGTGACCGAT CACCCCGACA CGGATCTGCC GACCCGCGAC
ATCGCCCGCG CCCTGGTCTT CGATCCTTCG AACCGCCTTC TCCTGATCGA GTACGAGGCG
GTGCGCCCGA TCGATCCGGC CGATCCCGAT GCCCGCGGCT TCTGGTTCAT GCCCGGCGGC
GGGCTGGAGC CGGGCGAGAG CCACGAGGAG GCCTGCCGGC GCGAACTCTC GGAGGAGATC
GGCGTCGCAG ACGTGGAACT CGGACCCTGC GTCGCCGTCT GCGACGGGCC GTTCCACCTG
TTCCGCAAGC CGCGTCATGC CCGCGAGCGC TACTTCGTGG TCCGGCTCGC GAGCGACCGC
GTCGATACCA GTCGGCTGGC CGAGACCGAG GACAATCCCG TCCGCGGCAC CCGCTGGTGG
CCGCTCGATG AACTCGCGGC TTCCGCCGAG CGTGTGGAGC CCGCGGGACT GGCCAAGCTG
GCGCAACGAA TCGCCGCTGG TGACGTTCCG GACCAGCCCG TCCGCCTCAC TTGGCGGGAC
GCTTGA
|
|---|
| Protein sequence | MACWVAGLDG CRGAWAGALI DLDDPARWRC ARFPRVIDLL DGPEAPVCVG IDVPIGLPDR
VSGGRSADRA ARAFLGAGRS SVFPVPPRAA VYAGSYDEAK VLSRAHSEPP FAPSIQCWNI
LRYVREADEL LRARSDLVTR LHEVHPEVAF FRLNGEQRLS AGKKGPARAE GLAARRALLI
AAGLPAAMVG SPPPPGVAAD DHLDAMAALV VARDIAEGRA EPLPNAIECD SYGLPIVIWA
PAPLPAPLPM PFPAPFDRAP CHEELSPVTD HPDTDLPTRD IARALVFDPS NRLLLIEYEA
VRPIDPADPD ARGFWFMPGG GLEPGESHEE ACRRELSEEI GVADVELGPC VAVCDGPFHL
FRKPRHARER YFVVRLASDR VDTSRLAETE DNPVRGTRWW PLDELAASAE RVEPAGLAKL
AQRIAAGDVP DQPVRLTWRD A
|
|---|
| |