| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1384 |
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| Symbol | |
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| ID | 5831237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1553944 |
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| End bp | 1555416 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641367184 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001638856 |
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| Protein GI | 163850813 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00262831 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCCGCC GCTCCCTTCC AGGCGCCCTT CCGGTCGCGC TCGCCCTGAC GACCCTCGCC
GGATCGCCCG CCCTGGCCCA GCCCACCGGC CGGCCGGTCT ATGAGGGCGC GGGCGGCGAC
CTGCGGATCG CGGTGGCCCA ACCGGAATCG ACGAGCCAAG CCTCCGGCGG CTACGTGCGC
TCGATCGAGC CCTCGCTCGG GCCCTTCGGC GACCCGCTCG GCCTGCGGCC CCTGCTGAAG
GAGCGGGGCA TCGAGTACAG CCTCACCTAC ATCGCCGAGA CGCTCGGCAA TCCCGTCGGC
GGCATTCGCC AGGGGGCGAT CGTCGAGGAC CGGCTGAACC TGCGGCTCAA TCTCGACCTG
CAACGGCTCG CCGGCTGGGA CGGCGCCACG GTGCATGCCA ACGCCTACTT CATCCACGGC
ACCGGCCTGT CGCGCTACGA TGTCGGCAAC CTGCTGGCCG CCAGCGTGAT CGAGGCGCTG
CCCGCCTCCC GCCTCTACGT GCTCTGGCTC GACCAGCAGC TCTTCGACGG CCAACTCGGC
ATCCGGATCG GCCAGCAGGC GGCCGACACC GAGTTCTTCG TCAGCCAGAC CGCGACCCTG
TTCGTGAACT CGACCTTCGG CTGGCCGGCG ATCACCGCGC TCGACCTGCC GAGCGGCGGC
CCGGCCTACC CGCTCGCGAC GCCCGCGATC CGGGCCAAAT ACGTGCCGGG CAACGGCTTC
TCCCTCCAAG CCGGGCTCTA TGACGGCGAT CCGGCCGGGG CCAATCGCCC GGGCGACGAC
CCCGAGGGGC AGCGCCTCGA CCGCACCGGC ACCAATTTCC GCACCCGCGA TCCCGCCCTC
GTCGTGGCCG AGGCGACCTA CGCCTTCAAC ACGCAGGAGG GTTCGAAGGA ACTGCCCGGC
GACATCACCC TCGGGGGCTG GCAGCATTTC GGGCGCTTCG AGAGCTTGCG CTTCGACCAG
ACCGGCCTGC CGCTCGCCGA CCCGAACTCC ACCGGCATCG GCCGGCGCCT GCGCGGCAAT
GCCGGGATCT ACGCGGTCTA CGATCAGACG CTCTACCGGG AATCGGGCAA GGACGACGAG
GGCCTCGGCT TCTTCCTGCG CGCGGCGTGG TCGCCGACCC GCTCCAGCCT CGTCTCCGCC
TATCTCGATA CCGGGCTCGC CTATAAGGGC CTGTTGCCGG GCCGCGACAA CGACACGGTG
GGCCTTAGCC TGGCGCAGGC CCGCCTCTCC GACGACGCGC GCCGCTCCGA CATCGACACC
ATCGTCCTGA CCGGCACGCC GATGCCGCGG CGGCGGGCCG AGACGGTGAT CGAGGCGACC
TATCAGGCGG TGGTGGTGCC GGGCTTCACC GTCCAGCCGG ACGCGCAACT GATCCTGCAT
CCCGGCGGCG GCATCGCCAA TCCGCGCGAC CCGGAAGGCC GCCGGGTGCG CAACGCCGCC
GTGCTGGGGC TTCGCGCGAC GGTTCAGTAT TGA
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| Protein sequence | MSRRSLPGAL PVALALTTLA GSPALAQPTG RPVYEGAGGD LRIAVAQPES TSQASGGYVR
SIEPSLGPFG DPLGLRPLLK ERGIEYSLTY IAETLGNPVG GIRQGAIVED RLNLRLNLDL
QRLAGWDGAT VHANAYFIHG TGLSRYDVGN LLAASVIEAL PASRLYVLWL DQQLFDGQLG
IRIGQQAADT EFFVSQTATL FVNSTFGWPA ITALDLPSGG PAYPLATPAI RAKYVPGNGF
SLQAGLYDGD PAGANRPGDD PEGQRLDRTG TNFRTRDPAL VVAEATYAFN TQEGSKELPG
DITLGGWQHF GRFESLRFDQ TGLPLADPNS TGIGRRLRGN AGIYAVYDQT LYRESGKDDE
GLGFFLRAAW SPTRSSLVSA YLDTGLAYKG LLPGRDNDTV GLSLAQARLS DDARRSDIDT
IVLTGTPMPR RRAETVIEAT YQAVVVPGFT VQPDAQLILH PGGGIANPRD PEGRRVRNAA
VLGLRATVQY
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