Gene Mext_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1336 
Symbol 
ID5831804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1487236 
End bp1488462 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content73% 
IMG OID641367129 
Producthypothetical protein 
Protein accessionYP_001638808 
Protein GI163850765 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.616275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGC GGCTCGGGAA ACGGCACGGC GGCCCGCTTC GGGCAACGAA GCCGCGGCGC 
AGGGCGCGCA GCGTCGGGCT GCTTCTGCTC GGCCTGCTGC CCGTCGCGGC CCAGGCCGAG
CCGCTGGCGA TCCACTATCT GGAGCGGCGC ATCGAGCGCC CGACGCCCCT CAACAATGAA
GACCCGATCC CCGACGACGA GGGGCTGAAG GGCGCCGAAC TCGGGCTCAA GGATTCGAAC
GCCACCGGCC GCTTCGTGTC CCTCGGCTTC CGCCTCGACA GCCGCGTCGT CGGGCCCGAC
GAGGATCTTC GCGCCGCCTT CCGCGCGCTG GGCGAGACCC CCCGCTTCGT CGTTCTGAAT
GTGCCGGCCG AGGACGTGCT GGCGCTCGCC GACATGCCCG AGACCAAGGG CACCGTGTTC
CTCAATGTCG GCGCGCCGGA TACGCGCCTG CGCGAGGCCG ATTGCCGGCC GCGCCTGCTC
CACGTCCTGC CCTCGCGGGC GATGCTCGCC GACGCGCTGG TGCAGTTCCT CGCCTACAAG
CGCTGGACCC GCATCCTGCT GCTCTCCGGC CCGGCTCCGG CCGACGCGCT CTATGCCGAG
GCGGTGAAGA AGAGCGCCAA GAAGTTCGGC GCGCGGATCG TGGCCGAATC CCGCTTCGAC
CCGCAGGGGG GCGACACCCG CGACACCGCT TTGCGCGAAT TCGTGCTGCC CACCCGCGGC
CCGGAGCACG ACGTGGTCGC GGTGGCCGAC GAGGCGGGGG CGTTCGGGGC GAACCTCGTC
TACAACACCG CCGCGGCCCG GCCCGTGGTC GGCACGCAGG GGCTCACGCC GGCGGCCTGG
GGCCGTCCGG TCGAGGCCTG GGCGGCGGTG CAACTCCAGA CCCGGTTCCG GCGGCTCGCG
GGGCGGGCGA TGCGCCCGAT CGACTATGCT GGCTGGATGG CCGTGCACGC GCTCGGCGAG
GCGGCGGTGC AGGCACGCAG CACCGATCCC GACACGGTGG CGGCCCTCAT GCTGTCGCCG
CGCTTCGAGG TCGGCGGCTT CAAGGGGCGC CACTTGAGCT TCCGCGCCTG GGACGGGCAG
TTGCGCCAGC CGGTCTTCCT GCTCTGGCCG GGCGCGGTGA CCGCCACCGC GCCGATCGAG
GGCTTCCAGC ACCACCGCAC CGAACTCGAC ACGCTCGGCC CCGACGAGCC GGAGAGCGCG
TGCCGGGCTT TCCGGAAACC GGGCTGA
 
Protein sequence
MLARLGKRHG GPLRATKPRR RARSVGLLLL GLLPVAAQAE PLAIHYLERR IERPTPLNNE 
DPIPDDEGLK GAELGLKDSN ATGRFVSLGF RLDSRVVGPD EDLRAAFRAL GETPRFVVLN
VPAEDVLALA DMPETKGTVF LNVGAPDTRL READCRPRLL HVLPSRAMLA DALVQFLAYK
RWTRILLLSG PAPADALYAE AVKKSAKKFG ARIVAESRFD PQGGDTRDTA LREFVLPTRG
PEHDVVAVAD EAGAFGANLV YNTAAARPVV GTQGLTPAAW GRPVEAWAAV QLQTRFRRLA
GRAMRPIDYA GWMAVHALGE AAVQARSTDP DTVAALMLSP RFEVGGFKGR HLSFRAWDGQ
LRQPVFLLWP GAVTATAPIE GFQHHRTELD TLGPDEPESA CRAFRKPG