| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1265 |
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| Symbol | |
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| ID | 5833371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1401964 |
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| End bp | 1403790 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641367058 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001638738 |
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| Protein GI | 163850695 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.879722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC GCAACATCGC CATCATCGCC CACGTCGACC ATGGCAAGAC GACGCTGGTC
GACAAGCTGC TTCAGCAGTC TGGCACCTTC CGCGAAAACC AGCGGGTCGA GGAGCGGGCG
ATGGACTCCA ACGACCTCGA GAAGGAGCGT GGCATCACGA TCCTGGCCAA GGCGACCTCG
GTCGTCTGGC AGGATACCCG CGTCAACATC GTCGATACTC CCGGCCACGC CGATTTCGGT
GGTGAGGTCG AGCGCATCCT CTCGATGGTC GACGGCGTGA TCGTGCTGGT CGACGCCGCC
GAGGGCCCGA TGCCGCAGAC CAAGTTCGTG GTCGGCAAGG CGCTCAAGAT CGGCCTTCGC
CCGATCGTGG CCATCAACAA GGTCGATCGT CCGGATGCGC GCATCAACGA GGTCGTGAAC
GAGGTGTTCG ACCTGTTCGC GGCGCTCGAC GCCACCGACG AGCAGCTCGA CTTCCCGATC
CTCTACGGTT CGGGCCGCAA CGGCTGGATG GCCGATTCGC CGGACGCCTC GCCGGATGTC
GGCCTCGCGC CGCTGTTCGA CCTCGTGCTC AAGCACGTGC CGCAGGCCCG CGTCGAGGAC
GGTCCGTTCC GGATGCTCGG CACCCTGCTC GAAGCCAACC CCTTCCTCGG CCGCATCATC
ACCGGGCGCA TCGCCTCGGG CACGGTGAAG CCGAACCAGT CGATCAAGGT GCTCTCGCGC
GACGGCAAGG TCGTGGAGAC CGGTCGCGTC TCGAAGATCC TGGCCTTCCG CGGCCTGGAG
CGCGCGCCGA TCGATATCGG CGAGGCGGGC GACATCGTCT CCATCGCCGG TCTGCTCAAG
GGCACCGTGG CGGATACCTT CTGCGATCCG GCCGTCAACG AGCCGATCCA GGCCCAGCCG
ATCGATCCGC CGACCGTCAC CATGTCCTTC ATCGTCAACG ATTCGCCGCT GGCCGGCACC
GAGGGCGACA AGGTCACGAG CCGCATGATC CGCGACCGCC TGTTCAAGGA GGCCGAGGGC
AACGTCACGC TCAAGATCGA GGAAGCCGCC GACAAGGACT CGTTCTACGT CTCCGGCCGC
GGCGAGCTGC AGCTCTCGAT CCTGATCGAG ACCATGCGCC GCGAGGGCTT TGAAATTGCC
GTGTCGCGTC CGCGCGTCGT GCTGGAGAAG GACGAGGCTG GCGAGATCCT GGAGCCGGTC
GAAGAGGTCG TGATCGACGT CGACGAGGAG TATTCGGGCG TCGTCGTGCA GAAGATGTCC
GAGCGCAAGG CCGAGATGAT CGAGATGCGG CCCTCGGGCG GCAACCGTCT CCGGCTCGTC
TTCCACGCTC CGACCCGCGG CCTCATCGGC TACCAGGGCG AGCTGATGAC CGACACCCGC
GGCACCGCGA TCATGAACCG CCTGTTCAAG GCCTACGAGG CCTACAAGGG CGAGATCGCC
GGCCGCCGCA ACGGCGTGCT GATCTCGAAC GACAAGGGTG AGGCCGTGGC CTACGCCATG
TGGAACCTCG AAGACCGCGG CCCGATGATG ATCGAGCCCG GCGCCAAGGT CTATCAGGGC
ATGATCGTCG GCGAGCACAA CCGCGAGAAC GACCTCGAGG TGAACGTGCT CAAGGGCAAG
AAGCTCACCA ACATCCGCAC CACCTCGAAG GACGAGGCCG TGCGCCTGAC GCCGCCGATC
CGGATGACGC TGGAGAAGTC GCTGGCCTGG ATTCAGGACG ACGAGCTGAT GGAAGTCACG
CCGAAGTCGA TCCGCCTGCG CAAGATCCAC CTCGACCCGA ACGAGCGCAA GCGCTTCGAG
CGCTCGAAGG AAGCGCTGAC GGGCTAA
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| Protein sequence | MKLRNIAIIA HVDHGKTTLV DKLLQQSGTF RENQRVEERA MDSNDLEKER GITILAKATS
VVWQDTRVNI VDTPGHADFG GEVERILSMV DGVIVLVDAA EGPMPQTKFV VGKALKIGLR
PIVAINKVDR PDARINEVVN EVFDLFAALD ATDEQLDFPI LYGSGRNGWM ADSPDASPDV
GLAPLFDLVL KHVPQARVED GPFRMLGTLL EANPFLGRII TGRIASGTVK PNQSIKVLSR
DGKVVETGRV SKILAFRGLE RAPIDIGEAG DIVSIAGLLK GTVADTFCDP AVNEPIQAQP
IDPPTVTMSF IVNDSPLAGT EGDKVTSRMI RDRLFKEAEG NVTLKIEEAA DKDSFYVSGR
GELQLSILIE TMRREGFEIA VSRPRVVLEK DEAGEILEPV EEVVIDVDEE YSGVVVQKMS
ERKAEMIEMR PSGGNRLRLV FHAPTRGLIG YQGELMTDTR GTAIMNRLFK AYEAYKGEIA
GRRNGVLISN DKGEAVAYAM WNLEDRGPMM IEPGAKVYQG MIVGEHNREN DLEVNVLKGK
KLTNIRTTSK DEAVRLTPPI RMTLEKSLAW IQDDELMEVT PKSIRLRKIH LDPNERKRFE
RSKEALTG
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