Gene Mext_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1260 
Symbol 
ID5831249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1396528 
End bp1397409 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content68% 
IMG OID641367053 
ProductABC transporter related 
Protein accessionYP_001638733 
Protein GI163850690 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.227509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGC AACTGCATCC CATCGAATCC GTCACCCAGG ACGCCGTCCC GGTCGCGCCT 
CCGGTGACCT CCGCCGCCCC ATCCCAGGCC TCGCCGCACA TCGTGGTCTC GGGCGTGGAC
AAGATCTTCC CCGTCCCCGG CGGCGAGGTC GTCGCCCTCA AGGACATCGA TTTCACCATC
AACCGCGGTG AATTCGTCTG CCTGCTCGGT CCGTCCGGCT GCGGGAAGTC GACGCTGCTC
AACGCCATCG CCGGCTTCTC GCACCCGACC CGCGGTGGCA TCGACGTCGA GGGCCGCACG
GTCGCCGCGC CCGGTCCCGA TCGGGGCATG GTGTTCCAGG AATACGCTCT GTTCCCCTGG
ATGACGGTGG CGCAGAACAT CGCCTTCGGT CTGGAGATCA AGGGCATGTC CCGCGGGGCG
ATCCAGGCGC GGGTGGCCGA GCTCCTCGAC ATGCTCAAGC TCGCCGAGTT CCGCGACCGC
TTCCCCAAGG ACCTGTCCGG CGGCATGCGC CAGCGCGTTG CGATCGCCCG CGTGCTGGCG
CTGGACAGCC CGGTGATGCT CATGGACGAG CCGTTCGGCG CGCTCGACGC CCTGACCCGT
CGCTCGCTGC AAGACGAGCT GCTGCGGATC TGGGCGGCGA CGGGCAAGAC CATCGTGTTC
GTCACGCACT CGATCGAGGA ATCGATCTAT CTCGCCGACC GCATCGTCGT GCTGACCTAC
CGCCCCGGTA CGATCAAGCG CGACCTGCGG GTCGAGCTGC CGCGCCCGCG CGACAGCGCC
TCGGCCGCCT TCAACGCCCT GAAGCGCGAC CTCTCCGCCC TCGTCACCGC CGAGCAGCAC
CGGTTCGAGC AGGTGGAGTT GAAGGGGCTG ACGACGGATT GA
 
Protein sequence
MSAQLHPIES VTQDAVPVAP PVTSAAPSQA SPHIVVSGVD KIFPVPGGEV VALKDIDFTI 
NRGEFVCLLG PSGCGKSTLL NAIAGFSHPT RGGIDVEGRT VAAPGPDRGM VFQEYALFPW
MTVAQNIAFG LEIKGMSRGA IQARVAELLD MLKLAEFRDR FPKDLSGGMR QRVAIARVLA
LDSPVMLMDE PFGALDALTR RSLQDELLRI WAATGKTIVF VTHSIEESIY LADRIVVLTY
RPGTIKRDLR VELPRPRDSA SAAFNALKRD LSALVTAEQH RFEQVELKGL TTD