| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1178 |
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| Symbol | |
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| ID | 5832122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1296926 |
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| End bp | 1298944 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641366971 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001638651 |
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| Protein GI | 163850608 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily
[TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0228689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGC CTAACGCCCC CGCTCTCGGT CTTCCGACCG GCAACGCGGG CGATCTGGCG
CATGCCGATC TCGTCGGGCG CCTCGCCCGC GAGATCACCG GCCAGGGACA GGCGGGTAGC
GCACCGTTCC AGCCCCAACT GCCGCAGACG CCTCAAGTCC CCCAGGGGCT TGAGACCCTT
CCCACCGGTT CCGGGCAGCC CGCGCTGCCC GGCGCCAATC TGGGTACGCC CTCCGTGCCC
TCGGGCGCGC TGCCGTCGGG ATTCCAGCCC GACCTGTCGG CGCAGGCCGC GCGCTCCTTC
GGCGCGCCGC CGGCCGGCCT GCCGGGCCTG ACCGGTCCGT CCCATGCCAA CCCGGTCGGC
GCGACGCCCG CGCCGGCGAG CGCAAACCTG TTCGACGTGG CGGCGATCCC CTCGGTGCAT
CCGTTCACGA ACCCGAACCG GCTGCCCGAA TTCTTCGTGC CGAGCCTGCC CGACGTCGCC
GCAGCGATCC CCGGTGGCCC CGACCTGCAC CGGCAGATCG CGGCCGACCA TCCCCGCGCC
AACGGCTTCG CCCACGCGCT GGCACCCCAC CTCGTGCCGC GCGATCCCGG CAAGCCCGGC
GGCGACGCCG CGCAGGAGCA TTTTTCGGAG TTCGGCCACC TGCCGCATCC GCGCACGCCG
GACAACACGG GCGATTACTA CTTCTTGAGC CCGGCCCCAC CGCCTGCGAG GGGCAAGAAG
GCTGCGGCCC AGCCGCGGGT CGAGCCCTCG CGCCACGCGG GGCCCGCCCC GCGGGTGACC
TCGCACGGGT CGGTTCCGGC CGGCGCGCCG TTCGATGTCG AGCACGTTCG CAAGGATTTT
CCGGCGCTGC ACCAGAGCGT GAACGGGCAC CGCCTCGTCT GGCTCGACAA CGCGGCCACC
ACCCACAAGC CGCAGAGCGT GATCGACGCC ACGAGCGAAT TCTACGGTCG CCACAACTCG
AACATCCACC GGGCCGCGCA CACGCTCGCC GCGCGCTCCA CCGACCTGTT CGAGGGCGGT
CGCGAGAAGA CGCGCCGCTT CCTCAACGCG CCGAGCAAGG ACGACATCGT CTTCCTGCGC
GGCACCACGG AAGCGATCAA CCTCGTCGCC AACTCCTACG GCCGGGCCAA TATCGGCCCC
GGCGACGAGA TCATCGTCTC GACCATCGAG CACCACGCCA ACATCGTGCC CTGGCAACTT
CTGGCACAGG CGACCGGCGC GACGATCCGG GTGATCCCGG TCAACGATCG CGGCGAGATC
ATCTTCGAGC AATACGCGGC TTTGCTCTCG GGCCGCACCA AGATCGTCTC GGTGACGCAT
GTCGCCAACG CGCTGGGCAC CGTGAACCCG ATCCGGGAGA TCATCGCTCT GGCGCATGCC
TACGGCGTGC CGGTGCTGGT CGATGCCGCG CAATCGACGC CGCACATCCC CATCGACGTG
CAGGCGCTCG ACGCCGATTT CCTCGTCTTC TCCGGCCACA AAGTGTTCGG GCCGACCGGC
ATCGGCGCCC TGTATGGGAA GCGGCACCTC TTGGAGGCGA TGCCGCCGTG GCAGGGCGGC
GGCCACATGA TCGAGGACGT CACCTTCGCT AAGACCGTCT ACAAGGGCGC ACCCGAAAAG
TTCGAGGCGG GCACGCCCGA CATCGCCGGC GCGGTGGGTC TCGGTGCGGC GCTCGATTAC
CTGGAGAGCG TCGGCCTGCC GGCAATCGCG GCCTACGAGC ACGACCTGCT CGAATATGCG
CAGGAAGGCT TGGCTGACGT GAAGGGCCTG CGCCTGATCG GCACCGCGCT CAACAAGGCG
AGCGTCATGT CCTTCACGGT CGATGGCCTC ACCAACGAGG CCGTCGCCCA CCACCTCGAT
TCCCTCGGGA TCGCGGTGCG CTCGGGCCAC CACTGCGCCC TGCCGGCGCT GCGCCGCTTC
GGCGTCGATC AGTCGGTGCG CGCCTCGCTG GCCTTCTACA ACACGCGGGA GGACGTCGAC
CTCTTCCTGC GCGGGCTGCA CACCTTACCG CGGCACTGA
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| Protein sequence | MTTPNAPALG LPTGNAGDLA HADLVGRLAR EITGQGQAGS APFQPQLPQT PQVPQGLETL
PTGSGQPALP GANLGTPSVP SGALPSGFQP DLSAQAARSF GAPPAGLPGL TGPSHANPVG
ATPAPASANL FDVAAIPSVH PFTNPNRLPE FFVPSLPDVA AAIPGGPDLH RQIAADHPRA
NGFAHALAPH LVPRDPGKPG GDAAQEHFSE FGHLPHPRTP DNTGDYYFLS PAPPPARGKK
AAAQPRVEPS RHAGPAPRVT SHGSVPAGAP FDVEHVRKDF PALHQSVNGH RLVWLDNAAT
THKPQSVIDA TSEFYGRHNS NIHRAAHTLA ARSTDLFEGG REKTRRFLNA PSKDDIVFLR
GTTEAINLVA NSYGRANIGP GDEIIVSTIE HHANIVPWQL LAQATGATIR VIPVNDRGEI
IFEQYAALLS GRTKIVSVTH VANALGTVNP IREIIALAHA YGVPVLVDAA QSTPHIPIDV
QALDADFLVF SGHKVFGPTG IGALYGKRHL LEAMPPWQGG GHMIEDVTFA KTVYKGAPEK
FEAGTPDIAG AVGLGAALDY LESVGLPAIA AYEHDLLEYA QEGLADVKGL RLIGTALNKA
SVMSFTVDGL TNEAVAHHLD SLGIAVRSGH HCALPALRRF GVDQSVRASL AFYNTREDVD
LFLRGLHTLP RH
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