| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1139 |
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| Symbol | |
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| ID | 5834083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1246263 |
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| End bp | 1249454 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641366934 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001638614 |
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| Protein GI | 163850571 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCCG CCATCTTCGT CGACCGGCCG CGCCTTGCGG TGGTGATCGC CATCGTCATC
TCGATCGCGG GCGCGCTGGC GCTCCTGACG ATCCCGGTGG CGCAGTACCC CGACATCGTG
CCGCCGCAGG TCTCGGTGAC CACGACCTAT CCGGGCGCAT CCGCCGACGT GGTGGAATCG
ACGGTCGCGC AGCCGATCGA GTCCCAGGTC GTCGGCGTCG ACAAGATGAT CTACATGAAG
AGCGTCAGCG GCAACGACGG CAGCTACACG CTCACCGGCT CGTTCGAGCT CGGCACCGAT
CCCGACATCA ATGCGGTCAA CGTCAACAAC CGCGTCCAGA TCGCCCTCGC CAAGCTGCCC
GAGGACGTTC GCAAGCAGGG CGTCACCGTC AAGAAAAAAT CCTCGGCCCT TCTCGGCGTC
CTGGCGGTCT ACTCGCCAAA ATCGACTCAA GACCCGCTTT TCATCTCCAA CTACGTCACG
ATCAACCTGC TCGACCGCAT CAAGAGCACG CCCGGCGTCG GCGATGCGAC GCTGTGGGGC
CCGCAGGATT ACGCGATGCG AGCCTGGGTG CGCACCGACC AGCTCACCGG GCTCAGCCTG
ACCACGGGCG ATGTCATCGG GGCGATCCAG GCCCAGAACG TGCAGGCGCC GGTCGGGCGG
ATCGGTGCCC GGCCGATCTC GGACGAGCAG CAGCTTCAGC TCAGCATCCA GACGCAAGGG
CGCCTGACCT CCGCGGAGCA GTTCCGCAAC ATCGTGCTGC GCACCAACCC GGACGGGTCG
GTGCTGCGCC TCGGCGACGT GGCGAGAGTC GATCTCGGCG CGGCCAATCT CGACCGTGAG
ACGCGACTCA ACGGCAGCCC GGCGACGGTG ATCGCGATCT ACCAGTCGCC CGGCGCCAAC
GCCCTCTCGA CCCTGAAGGA GGTCGAGAGG CGGGTCGGAG AGCTGGCGAA GACCTTCCCC
GAGGGGTTGG CCTGGAAGGT CACCTACGAT CCGACCGCCT TCATCACCGA AACGGTGCAC
GAGGTGCAGA AGACCCTGGT CGAGGCCTTC GTGCTCGTTG TGATCGTGGT GTTCCTGTTC
CTTGGTAGCC TGCGCGCCAC GCTGATCCCG ACGCTGGCCG TGCCTGTCAG CTTGATCGGC
ACCTTCATCG TCCTCAAGGC GGTCGGCTAC TCGGCGAACT CGGTTTCGCT TCTCGCCCTG
GTGCTCGCCA TCGGGATCGT CGTCGATGAC GCCATCGTGG TGGTCGAGAA CGTCGAGCGC
GTGATGGAGG AGCACCCGGA GCTGTCACCC CGGGATGCGA CGAAGCGGGC CATGGCCGAG
ATCACCGCCC CGATCATCGC CATCACGCTG GTCTTGCTCT CGGTCTTCGT GCCGGTCGCC
TTCGTGCCCG GTATCTCGGG CGAGCTCTTC CGCCAGTTCG CCGTCGCGGT CGCGGTCTCA
ATGTTCATCT CGGCGGTCAA CGCGCTGACC CTGTCGCCGG CTCTCTGTGG CGTGCTGCTG
CGCCCGCACC ACGGCCCTCG CCGGGGTATC ATGGGCATGG TGATGCGCTC CATCGACCGT
GTCAGCAACG GCTATGGTGC CGCCGTGGCG CGCATCGTGC GCTTCTCGAT TCTCGGCCTC
GTGCTCGCTG GCGCCGCGGC CTACGGCGCG ACCGAACTCG CGAAGCGAAC CCCGACCGGC
TTCCTGCCCG AAGACGACCA AGGCGCCTTC TTCGTCGTGG TGCAGTTGCC GGAAGGCGCA
TCGGTCGGGA GGACCTCCGA GGTCGTGGCC CGGGCCGAGC AGATCCTGCG GCAGGAGCAT
GCGGTTGCCG ACACCACCTC GGTGATCGGC CTCAACTTCA TCGACAACTA CTCCCAGGGC
AACGCGGCCT TCCTGGTCGT GACCCTCAAG CCGTTCGAGG AGCGCAAGGC TGCCGCGGAC
GGGGCGGCGG CCATGATTGC GCGCCTCGGC CAGCAATTCC GGGAGATCCC CGGAGGCACC
GTCGTACCGC TTGCCCCTCC ACCCATCATC GGCCTCGGCA CCGGCGGTGG CTTCAGCTAC
GTGCTGCAGG ATCTACGCGG TGGCGATCCG AAGGAACTCG CTCAAGTCCT GCGCGGCTTG
GTGGTAGCAG CGAACCAGGA TCCGCAGCTC AACCGCGTGT TCAGTACCTT CTCGGCGACG
AACCCATCGG TCTATCTCGA TATCGATCGT GACAAGGCGC AGGTTCTCGG AGTGCCCCTG
AGCGCCGTGT TTCAAGCGCT ACAGGCTTCG CTCGGCGGCT ACTACGTCAA CGACATCAAC
CTTTTCGGCC GTACCTGGCA GGTGCAGGTT CAGGCGGAGG CCGCAGACCG GACCAAGATC
GACGACATCT ATCGGATCAA CGTGCGAAAC AAGGACGGCG AGATGGTGCC GCTGCGCTCG
CTCGCGGAGG TTCGGATCGT GGTGGGGCCG CCGGCGCTGA TCCGCTACAA CAACCTTCGC
GCCGTCACGA TCCAGGGCTC GCCCGCGCCG GGCGTCTCGT CCGGTCAGGC GCTCGCCGCC
ATGGACGGCG TCGCGGCCCG GACCCTGCCT GCGGGCTTCG GCGGCGAGTG GACGGACACG
GCGTTCCAAG AGAAGCGCGC CGAGGGCAAG ACCGCCATCA TCCTGGGCTT CGCGGTCCTG
TTCGCGTTCC TGTTTCTGGT CGCGCTCTAC GAGAGCTGGA CCATCCCCGT CCCGGTGCTG
CTGTCGGTCA CGGTCGGGAT CGCCGGGGCC TACGCGTCCA TGGTGTGGGG TAAGCTCACC
CTCGATCTCT ATGCGCAGAT CGGCATGATT GTGCTCATCG GGCTGGCTGC CAAGAATGGC
ATCCTGATCG TCGAGTTCGC CAAGGAGCAG CGGGAGAAGG GCGTTCCGCT TCAGAAGGCT
GCCACCGAAG GCGCGCGCCT GCGCTTCCGC CCGGTGATGA TGACCTCCTT CGCCTTCATC
CTGGGCCTGC TCCCCCTGGT CATCGCTGTC GGAGCCTCGC AGCTCGCCCG ACGCAATGTC
GGAACGCCGG TCTTCGGCGG CATGATCGCC GCGTCATTCC TCGGCATCTT TGTGATCCCG
CCCCTCTACG TCCTGTTTCA GGGCCTGCGC GAGCGGGCCT GGAGCCTTAT GAGCCGCAAG
GGAGCGAAAC AGCGGGCGGA ACCGCCAGCT GAAGGCGCAA GCGGCGCCCC GAAGCACTTG
CCGGCCGAGT GA
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| Protein sequence | MFSAIFVDRP RLAVVIAIVI SIAGALALLT IPVAQYPDIV PPQVSVTTTY PGASADVVES
TVAQPIESQV VGVDKMIYMK SVSGNDGSYT LTGSFELGTD PDINAVNVNN RVQIALAKLP
EDVRKQGVTV KKKSSALLGV LAVYSPKSTQ DPLFISNYVT INLLDRIKST PGVGDATLWG
PQDYAMRAWV RTDQLTGLSL TTGDVIGAIQ AQNVQAPVGR IGARPISDEQ QLQLSIQTQG
RLTSAEQFRN IVLRTNPDGS VLRLGDVARV DLGAANLDRE TRLNGSPATV IAIYQSPGAN
ALSTLKEVER RVGELAKTFP EGLAWKVTYD PTAFITETVH EVQKTLVEAF VLVVIVVFLF
LGSLRATLIP TLAVPVSLIG TFIVLKAVGY SANSVSLLAL VLAIGIVVDD AIVVVENVER
VMEEHPELSP RDATKRAMAE ITAPIIAITL VLLSVFVPVA FVPGISGELF RQFAVAVAVS
MFISAVNALT LSPALCGVLL RPHHGPRRGI MGMVMRSIDR VSNGYGAAVA RIVRFSILGL
VLAGAAAYGA TELAKRTPTG FLPEDDQGAF FVVVQLPEGA SVGRTSEVVA RAEQILRQEH
AVADTTSVIG LNFIDNYSQG NAAFLVVTLK PFEERKAAAD GAAAMIARLG QQFREIPGGT
VVPLAPPPII GLGTGGGFSY VLQDLRGGDP KELAQVLRGL VVAANQDPQL NRVFSTFSAT
NPSVYLDIDR DKAQVLGVPL SAVFQALQAS LGGYYVNDIN LFGRTWQVQV QAEAADRTKI
DDIYRINVRN KDGEMVPLRS LAEVRIVVGP PALIRYNNLR AVTIQGSPAP GVSSGQALAA
MDGVAARTLP AGFGGEWTDT AFQEKRAEGK TAIILGFAVL FAFLFLVALY ESWTIPVPVL
LSVTVGIAGA YASMVWGKLT LDLYAQIGMI VLIGLAAKNG ILIVEFAKEQ REKGVPLQKA
ATEGARLRFR PVMMTSFAFI LGLLPLVIAV GASQLARRNV GTPVFGGMIA ASFLGIFVIP
PLYVLFQGLR ERAWSLMSRK GAKQRAEPPA EGASGAPKHL PAE
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