| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1050 |
|---|
| Symbol | |
|---|
| ID | 5831152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1147331 |
|---|
| End bp | 1148026 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641366845 |
|---|
| Product | ChaC family protein |
|---|
| Protein accession | YP_001638526 |
|---|
| Protein GI | 163850483 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3703] Uncharacterized protein involved in cation transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0448868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCC GTCCCCTGTC GCTCTCCCTC GACCTCATCG CCCGTGCCCA TCCCGACACC
GTCCCCGATG ATGAGACCGC ACTGACGCTG CTCTCGGACG CTGACCTTGC GCCCGAACTC
GCGGCGATGC TGGCGCGCCG CGCTTCCCCT GAGGGCGGCC TGTGGGTGTT CGCCTACGGC
TCGCTGCTGT GGAACCCGGA ATTCGCTTAT CACGACCAGC GGCTCGGCAC GCTGCGGGGC
TGGCACCGCC GGTTCTGCCT GTTGCAGCGG CGCTTTCGCG GCACGCCGGA GAATCCGGGC
TTCGTGCTGG GGCTCGACCG GGGCGGGATC TGTCGCGGCG TCGCCTTCCG CCTGGACGAT
GCCGACCCGC ACGCCATCCT GATGCCGGTC TGGCGGCGGG AGATGAAGAG CAAGGGCTAC
GAGGGCCGCT GGGTCTCGGT GGAGACGTCG GACGGGCCGG TCACGGCGCT GACCTTCATG
GTGAACCGGC AGAGCGACCG CTACACCGGC CGCCTCTCGG ATACCGAGAT CGCCGACAAG
ATCGCAACGG CCTGCGGGCA TCTCGGCCCG AGCGCCGAAT ATCTGCTCCG CACCGTGGAG
GCCTGCGCCC GGCTCGGCAT CCACGACCGG CACCTGTGGT CGCTCCAGGC GCTCGTGGCC
GAGCGCCTGC GGGAGCGGCG CGCGGCCTGC GCGTAG
|
|---|
| Protein sequence | MASRPLSLSL DLIARAHPDT VPDDETALTL LSDADLAPEL AAMLARRASP EGGLWVFAYG
SLLWNPEFAY HDQRLGTLRG WHRRFCLLQR RFRGTPENPG FVLGLDRGGI CRGVAFRLDD
ADPHAILMPV WRREMKSKGY EGRWVSVETS DGPVTALTFM VNRQSDRYTG RLSDTEIADK
IATACGHLGP SAEYLLRTVE ACARLGIHDR HLWSLQALVA ERLRERRAAC A
|
|---|
| |