| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1005 |
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| Symbol | |
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| ID | 5833661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1083687 |
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| End bp | 1084718 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641366787 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001638481 |
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| Protein GI | 163850438 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGAA TCCTCACGGT GTCCTCCACG GTGCTTTCCA TGATCCCCGG CGCGGACGAG
GCGCGCAGCC TTGTGCTCGA CGAGGGAACC GTTCCCGAGC GGCTCGACCG CGTCCTTGCC
CGCGTCTTCG ACGATCTCTC CCGTGCCCGG CTCCAGGGCT TGGTGCGCGA GGGCCTCGTG
CGCTGCGACG GGATCGTGGT GCGCGATCCC GCGCGCAAGG TCGGGGCTGG CTGCCGGATC
GATCTCAGCG TTCCGGCGCC GCTTCCCGCC GAGCCGCTCG GCGAGGCTTT GCCGCTCGCC
GTCGTCCATG AGGACGAGGA TCTCATCGTC ATCGACAAGC CGGCGGGGCT CGTCGTGCAC
CCGGCGGCGG GGCACGAGGA CGGCACCCTC GTCAATCGGC TGATCGCGCA TTGCGGGGCG
AGCCTGTCCG GAATCGGCGG CGTGCGCCGG CCCGGCATCG TCCACCGCCT CGACAAGGAC
ACGAGCGGCC TGCTCGTCGT CGCCAAGAAC GACCTCGCCC ATCAGGGCCT CTCGGCCCAG
TTCGCCGACC ATGGCCGCAG CGGCGCCCTG GAGCGGGCCT ATCTCGCCCT GGTCTGGAAT
GTGCCGGAGC CGCGGGCCGG CACGATCCGC GCGAACCTCG CGCGCTCGCG CCACAATCGC
GAAAAGATCG CCGTGGTCCG CGACGGCGAG GGGCGGGAGG CGATCACCCA CTACCGGGTC
GAGGACGTGC ACGGGGAAGG CGGCGTTACG GCCCTGCTGC GCTGCCATTT GGAAACCGGG
CGCACCCACC AGATCCGGGT GCATCTGAGC CATCGCGGCC ATCCGCTGCT GGGGGACGCG
GTCTATGGCG GCGCCTTCAA GACCAAGGCG GCCCGGCTCA GCGAACCCGC TCGCGCCGCC
CTGGACGCTC TCGGACGACA GGCCTTGCAC GCGGTCGAAC TCGGATTTCT CCACCCGCGC
TCCGGCGAGC GCCTGCGCTT CGAGAGCCCG CTGCCGGAGG ATTTTTCGCG GCTGCTCGCC
GCCCTCGGCT GA
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| Protein sequence | MTRILTVSST VLSMIPGADE ARSLVLDEGT VPERLDRVLA RVFDDLSRAR LQGLVREGLV
RCDGIVVRDP ARKVGAGCRI DLSVPAPLPA EPLGEALPLA VVHEDEDLIV IDKPAGLVVH
PAAGHEDGTL VNRLIAHCGA SLSGIGGVRR PGIVHRLDKD TSGLLVVAKN DLAHQGLSAQ
FADHGRSGAL ERAYLALVWN VPEPRAGTIR ANLARSRHNR EKIAVVRDGE GREAITHYRV
EDVHGEGGVT ALLRCHLETG RTHQIRVHLS HRGHPLLGDA VYGGAFKTKA ARLSEPARAA
LDALGRQALH AVELGFLHPR SGERLRFESP LPEDFSRLLA ALG
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