Gene Mext_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0996 
Symbol 
ID5833339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1073359 
End bp1074666 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID641366778 
Productadenylosuccinate lyase 
Protein accessionYP_001638472 
Protein GI163850429 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.546306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.992281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCC GCTACTCCCG TCCCGAGATG ACCGCAATCT GGTCGCCGGA GAGCCGGTTC 
CGGATCTGGT TCGAGATCGA GGCCCACGCC ACGACGGCTC TGGCCAATAT CGGCGTCGTG
CCGAAGGAGG CCGCCGAGAA GGTCTGGGAG AAGGGCCGCG ATGCGGTCTT CGACGTCGCC
CGCATCGACG CGATCGAGGC GGTGACGAAG CACGACGTCA TCGCCTTCCT CACGCATCTG
GCCGAGATCG TCGGACCGGA GGCGCGCTTC GTCCACCAGG GCATGACCTC CTCGGACGTG
CTCGACACCT GCCTCAACGT GCAGCTCACC AAGGCCGCCG ACATCCTGAT CAAGGATCTC
GACGCGCTGC TGGCCGCGCT GAAGCGGCGC GCCTTCGAGC ACAAGCTCAC CCCCACCATC
GGCCGCTCGC ACGGCATCCA TGCCGAGCCC GTCACCTTCG GCCTCAAGCT CGCCCAGGCC
TATGCCGAGT TCGCCCGCGC CAAGGACCGG CTCATCGCCG CCCGCAAAGA GGTCGCGACC
TGCGCGATCT CGGGGGCGGT CGGCACCTTC GCCAACATCG ACCCGCGGGT GGAGGAATAT
GTCGCCGAGC AGATGGGGCT CGCACCGGAG CCGGTCTCGA CTCAGGTGAT CCCGCGCGAC
CGCCACGCGA TGTTCTTCGC CGTGCTCGGC GTGATCGCCA GCTCCATGGA GCGGCTCGCA
ACGGAAGTGC GCCATCTCCA GCGCACGGAA GTGCTGGAGG CGGAAGAGTT CTTCTCCGAG
GGGCAGAAGG GCTCCTCGGC GATGCCGCAC AAGCGCAACC CGGTTCTCAC CGAGAACATC
ACCGGGCTCG CCCGCATGGT GCGCGGCTAC GTGACCCCGG CGCTGGAGAA CGTCGCGCTC
TGGCACGAGC GGGACATCTC GCATTCCTCG GTCGAGCGGA TGATCGGCCC GGACGCGACG
GTGACCCTCG ACTTCGCGCT CGCCCGGCTC ACCGGCGTGA TCGACAAGCT GCTGATCTAC
CCCGAGCAGA TGCAGAAGAA CCTCGACCGG CTCGGCGGCC TCGTCCACTC GCAGCGGGTG
CTGCTGGCGC TGACGCAGGG CGGCGTCTCG CGGGAGGACG CCTACCGGCT GGTCCAGCGC
AACGCGATGC CGGTCTGGCG CGGCGAGGGC GATTTCCTCA CGCTGCTCAA GGCAGATCCC
GAGGTGACCG CCGTGCTGAA GCCGGAACAG ATCGAAGAGT GCTTCGACCT CGGCTACCAC
CTCAAGCACG TCGACACGAT TTTTTCGCGG GTGTTCGGCG AAGCCTGA
 
Protein sequence
MIPRYSRPEM TAIWSPESRF RIWFEIEAHA TTALANIGVV PKEAAEKVWE KGRDAVFDVA 
RIDAIEAVTK HDVIAFLTHL AEIVGPEARF VHQGMTSSDV LDTCLNVQLT KAADILIKDL
DALLAALKRR AFEHKLTPTI GRSHGIHAEP VTFGLKLAQA YAEFARAKDR LIAARKEVAT
CAISGAVGTF ANIDPRVEEY VAEQMGLAPE PVSTQVIPRD RHAMFFAVLG VIASSMERLA
TEVRHLQRTE VLEAEEFFSE GQKGSSAMPH KRNPVLTENI TGLARMVRGY VTPALENVAL
WHERDISHSS VERMIGPDAT VTLDFALARL TGVIDKLLIY PEQMQKNLDR LGGLVHSQRV
LLALTQGGVS REDAYRLVQR NAMPVWRGEG DFLTLLKADP EVTAVLKPEQ IEECFDLGYH
LKHVDTIFSR VFGEA