Gene Mext_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0977 
Symbol 
ID5835807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1054015 
End bp1055256 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content72% 
IMG OID641366759 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001638453 
Protein GI163850410 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0727067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC CGATGGAGAC GATCGTCATT GTCGGGGCGG GGCAGGCCGG CTTCCAGGCC 
GCCGCCTCGC TGCGGGAGGC CGGATTCTCC GGTAGCCTGA CCCTGGTCGG TGACGAGGCC
GCGCTTCCCT ATCAGCGTCC GCCACTGTCG AAGGCCTATC TCGCCGGTAA GACCGATGCG
CGCGGTTTGC TGCTGCGGCA GGAGAGCTTT TTTGCCGAGC ACCGCATCGC GCACCGGCCC
GGGACACGGG TGACGGCGAT CGACCGCGCC GGGCGCAGCG TCCGGCTCTC GGACGGCGAG
GATCTGTCTT ACGACCACCT CATCCTGGCG ACGGGGACCC GCAACCGGGC GCTGCCGGTG
CCGGGGGCCG ATCTCGACGG CGTGCGCCAG CTTCGTTCCC TCGACGATGC CGATGCGCTG
CGCGCGGCAA TCGAGGGCAT CCACCGGATC GTCGTGGTCG GTGCGGGCTT CATCGGCCTC
GAATTCGCGG CGGTCTGCGC CGCCCGCGGC CTCTCCGTCA CGGTGATCGA GGCGGCCGAG
CGCGTCATGG CGCGGGCGGT CTCGCCCGAG ACCTCGGAGG CGTTCCGCGC CTTCCACGAG
GAGGCCGGCG TCACCTTCCT GTTCGGGGCG GGCGTCACTG CCATTGAGGG GGAGGGGGGA
CGGGCCGCGG CCGTCCGTAC CGCCGACGGG CAGAGCCTGC CCGCCGACCT CGTGCTCGTC
GGCATCGGCG TGGTGCCCAA CCAGGAACTC GCGGCGGAAG CCGGCCTCGC TGTGCGCGAC
GGCATCGAGA TCGATGCCTT CCTGGCAACC AGCGACCCGG CGATCTCGGC CATCGGCGAT
TGCGTGCGCT TCCCGAGCCG TTTCGCGTCC GGAATGCCCG GCGGCGACTG GGTGCGAATC
GAATCGGTGC AGAACGCGGT CGATCAGGGC CGCTGCCTCG CCGCGCGGCT CACCGGCCGG
CCCGCGGCCT ACGACGCAGT GCCGTGGTTC TGGAGCGATC AGGGGCCGCG CAAGCTCCAG
ATCGCCGGGC TCGCCGCGCC GTCTGACGCG AGCGTCCTGC GCCGGGCCGG CGCCGGCTTC
TCGGTGTTCC GCTTCCGCGA TGGCGCGCTC AGCGCGGTCG AATCGGTGGA TCGCCCCGCC
GACCACATGG CGGCCCGCCG CCTTCTGGCC GCGGGCAAGC GGCTGACGCC GGAGCAGGCC
GGCGATCCGG GTTTCGACCT CAAGGCCCTG GCGACGGGCT GA
 
Protein sequence
MSGPMETIVI VGAGQAGFQA AASLREAGFS GSLTLVGDEA ALPYQRPPLS KAYLAGKTDA 
RGLLLRQESF FAEHRIAHRP GTRVTAIDRA GRSVRLSDGE DLSYDHLILA TGTRNRALPV
PGADLDGVRQ LRSLDDADAL RAAIEGIHRI VVVGAGFIGL EFAAVCAARG LSVTVIEAAE
RVMARAVSPE TSEAFRAFHE EAGVTFLFGA GVTAIEGEGG RAAAVRTADG QSLPADLVLV
GIGVVPNQEL AAEAGLAVRD GIEIDAFLAT SDPAISAIGD CVRFPSRFAS GMPGGDWVRI
ESVQNAVDQG RCLAARLTGR PAAYDAVPWF WSDQGPRKLQ IAGLAAPSDA SVLRRAGAGF
SVFRFRDGAL SAVESVDRPA DHMAARRLLA AGKRLTPEQA GDPGFDLKAL ATG