Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0928 |
Symbol | |
ID | 5834052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1003303 |
End bp | 1005657 |
Gene Length | 2355 bp |
Protein Length | 784 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641366710 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001638404 |
Protein GI | 163850361 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCAGGC TTTCTCTACG CCGACCCGGA CAACGTCGAA AGAAACCGGA AGCCGCCTTG CGCCTGCCCA GCCTCAAGAC GCTGACGACG CGGATCAGCC GCGCGGCCCT GGCCTTCGAT GCCTGGGTCA ATGCGAGCCT GTACGAGGGC GGCCATTCCA CGACGGAAGC CTACGAGCGC TTCCAGGCGC GGATGCAGGT CTTCTCGGTC CGCGGCTGGA AGCGCTACGC CCTCGACCTC ACCAGCGAGG GTGTGACCAT TGGGACGGCG GGCGCCCTGC TTCTGCTGTT CCTGGCTCAG CCCGCTTTCA ACCTCACCAG CGACAACTGG CTGAAGGCCC AGGATCTCGC CGTCACCTTC CTCGATCGCT ACGGCACCGA AGTCGGACGC CGCGGCATCA AGCACGACGA CTCGCTGAAG TTCGACGACT TTCCCGAACT GATGATCAAG GCGCTGCTCT CGACCGAGGA CCGGCGTTTC TACGAGCATT GGGGCATCGA TCCGATCGGC ACCTCCCGCG CGCTCGTCTC GAATTCCTCC GGCAAGGGCA ACGTGCAGGG CGGTTCCACC CTGACGCAGC AGCTCGCCAA GAACCTGTTC CTGACCAACG AGCGCTCGCT GGAGCGCAAG GTCAACGAGG CGTTCCTCGC CTTCTGGCTC GAAGCGCACC TGACCAAGAA CCAGATTCTC AAGCTCTATC TCGACCGCGC TTATATGGGC GGCGGCACCT TCGGCGCGGT GGCGGCGGCG GATTACTATT TCGGCAAACG CCTGCAGGAC ATCACGCTGG CGGAAGCCGC GATGCTCGCC GGTCTGTTCA AGGCGCCGAC CAAGTACTCG CCCAACGTCA ACCTGCCCGC CGCTCGCGGC CGGGCGGTGG ACGTGCTGCA CAACATGGTC GAGGCGGGCT TCGTCACCGA GGGCCAGATC CAGACGGCGT TGCGCAACCC CGCGACCCCG GTGACTCGCA CCAAGGACAT CACCGCCGAC TACTACCTCG ATTGGGCCTT CAACGAGGTG AAGCGGATGG CCGATGCGGG CAAGCTCCGC AACGACCGCG TGCTCACGGT AAAGACGCCG CTCGACCTCT CGATCCAGCG CTCCGCCGAC CAGGCGGTCG AAAACATGCT GCGGCGGCTG GGCGACCAGT ACGACGTGGA CGAGGCCGGC GTGGTGATCC TCGATCCCGA CGGGGCGCTG CGTGCCATGG TCGGCGGTGC CGATTACGGC GAGAGCCAGT TCAACCGCGC CACCGATGCG CTGCGCCAGC CGGGCTCGTC GTTCAAGCCC TACGTCTACG CCGCGGCGCT CGCCTCGGGC CTGTTCAAGC CGGACACGCA GGTGGTGGAT TCGCCGGTCT GCGTCGGCAA CTGGTGCCCG CAGAATTACG GCCGCTCCTA TTCGGGGCGC CAGCCGATGT GGCTCGCGGT GGCCAAATCG GTCAACACGA TCCCGATCAA GGTCACCACG GCCATCGGCA AGGGGCTCGG CATCACCCAT GACTGGAAGG CGGCGAAGGC CGGCCGCGAG AAGATCATCC AGCTCGCGAA AGCGATGGGC GTAACGACGC CGCTGACCGA CACACCCTCG CTGCCGATCG GCGCCACCGA GGTGACGGTG ATGGACCAAG CGGCCGGCTT TGCCGTGTTC GCCAACGGGG GCAAGGTCGC CAAGCCCTAC GTCGCCAGCG AGGTGCGCAA TTCCAGCGGC GAGGTGATCT ACCGCCACGC CGACGAGAAG CCGGTGCAGG TGCTCTCGTC CCAGGTGACG GCCGACATGA ACTACATGCT CAACAAGGTC GTCGAGGAAG GCACCGCGCG AAAGGCCCAG ATCGAGGGCG TGAAGGTCGC GGGCAAGACC GGCACGACCA ACGGCTACCG CGATGCGTGG TTCGTCGGCT ACACCGGCAA CTATGTCGGC GCCGTCTGGT ACGGTAACGA CGACCACAGC CCGACCAACA AGATGACCGG CGGTTCGCTC CCCGCGATGA CGTGGCACGA GATCATGGCC CCTGCCCATC AGGGCATCGA ATTGAAGCCG ATGCCCGGCC TGAACGATCG CCGGAGCGCG CCGCAGGCCG CCCAGGCGCA GGCTGACGGC GCGGCGGCCG CCGCCAGCAC CGGCGGCCGG CTCTCGCGCC GCTCCTTCGA GGTATTGTCA GGCCTCAACG GCCTGTTCCG CAACGTCGAG ACCAACCGCT CCGCCGCCAA AAGCGAACCC GTCAAGAGCG AGCCCGGCAA GAGCGATCCG GCGCGCTCCG GCGCCGTCGC CCCCGATCGG ATGCGGGCGC CCGGCCTCGT GCCCGTCGAT GTCGCCGAGG GCGCGCGCGC CTCTGGCGGC TTCGGGACGC CCTGA
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Protein sequence | MPRLSLRRPG QRRKKPEAAL RLPSLKTLTT RISRAALAFD AWVNASLYEG GHSTTEAYER FQARMQVFSV RGWKRYALDL TSEGVTIGTA GALLLLFLAQ PAFNLTSDNW LKAQDLAVTF LDRYGTEVGR RGIKHDDSLK FDDFPELMIK ALLSTEDRRF YEHWGIDPIG TSRALVSNSS GKGNVQGGST LTQQLAKNLF LTNERSLERK VNEAFLAFWL EAHLTKNQIL KLYLDRAYMG GGTFGAVAAA DYYFGKRLQD ITLAEAAMLA GLFKAPTKYS PNVNLPAARG RAVDVLHNMV EAGFVTEGQI QTALRNPATP VTRTKDITAD YYLDWAFNEV KRMADAGKLR NDRVLTVKTP LDLSIQRSAD QAVENMLRRL GDQYDVDEAG VVILDPDGAL RAMVGGADYG ESQFNRATDA LRQPGSSFKP YVYAAALASG LFKPDTQVVD SPVCVGNWCP QNYGRSYSGR QPMWLAVAKS VNTIPIKVTT AIGKGLGITH DWKAAKAGRE KIIQLAKAMG VTTPLTDTPS LPIGATEVTV MDQAAGFAVF ANGGKVAKPY VASEVRNSSG EVIYRHADEK PVQVLSSQVT ADMNYMLNKV VEEGTARKAQ IEGVKVAGKT GTTNGYRDAW FVGYTGNYVG AVWYGNDDHS PTNKMTGGSL PAMTWHEIMA PAHQGIELKP MPGLNDRRSA PQAAQAQADG AAAAASTGGR LSRRSFEVLS GLNGLFRNVE TNRSAAKSEP VKSEPGKSDP ARSGAVAPDR MRAPGLVPVD VAEGARASGG FGTP
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