Gene Mext_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0876 
Symbol 
ID5834283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp953841 
End bp955373 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content70% 
IMG OID641366658 
Productmalonyl-CoA synthase 
Protein accessionYP_001638352 
Protein GI163850309 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0768548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC CGATCGTCAA TCACCTGTTC GGCCTCGTGC GCACCCATTG CCCGGCCGAT 
CCGGGCGCCA AGGTCTTCAT CGAGACCTCG GACGGCGCGC GCTACACCTA TGCCGACCTT
CTGGCCCGCT CCGGCGCCTA TGCCAGCGCG CTCCGGGCCC TTGGCGTGAA GCCTGGCGAC
CGGGTCGCGG TGCAGGTCGA GAAGAGCGCC GAGGTGATCT TCCTCTATCT CGGCGCGGTG
CGGGCCGGCG CGGTCTTCCT GCCGCTCAAC ACCGCCTATA CGGGACCCGA GATCGCCTAC
TTCCTCGGCG ACGCCGAACC GGCCCTGTTC GTCTGCGATC CCGCCCGCGA AGCCGACCTG
TCGGCGGTCG CGGGCCAGGC CGGCGTGCCG CAGACCCGCA CCCTCGACGC GTCCGGGCGC
GGCAGCATGG CGCAGGCCGC CGACGCGGCG AGCCCGGACT TCGCGGACGT GCCCCGCGGG
GCCGACGACC TCGCCGCGAT CCTCTACACC TCGGGCACGA CCGGGCGCTC CAAGGGCGCC
ATGCTGAGCC ACGACAACCT CGCCTCGAAC GCGCTCACGC TGGCGCAGTA TTGGCACTTC
ACCGAGCGCG ACGTGCTGAT CCATGCCCTG CCGGTGTTCC ACACCCACGG GCTGTTCGTG
GCCACCAACA TCGTCCTGGC CACCGGCGGC ACGATGCTGT TCCTGCCCCG GCTCGATGCG
AAGAAGATCC TCGAACTGAT GCCGCGGGCC ACCGCGATGA TGGGCGTGCC GACCTTCTAC
ACCCGGCTGC TCAAGGAGCC CGGCCTCACC CGCGAGGCGG CGGCCCGTAT GCGCCTGTTC
GTGTCGGGCT CCGCACCGCT GCTCGCCGAG ACCCATCGGG AATGGGCCCA GCGCACCGGC
CACGCCATCC TCGAACGCTA CGGCATGACC GAGACCAACA TGAACACCTC GAACCCCTAC
GAGGGTGCGC GGCGGGCCGG CACGGTCGGA TTCCCGCTGC CGGGGGTGAC CCTGCGCGTG
GTCGATCCCG AGACCGGCGC GCCGCTCGGG CCCGAGGAGG TCGGGATGAT CGAGGTGAAG
GGCCCCAACG TGTTCCAAGG CTACTGGCGC ATGCCGGAGA AGACCGCCGC CGAGCTGAAG
GTGGACGGCT TCTTCATCAC CGGCGATCTC GGCAAGATCG ACCGCGACGG CTACGTCCAC
ATCGTCGGGC GCGGCAAGGA CCTCATCATC ACCGGCGGCT ACAACGTCTA CCCGAAGGAG
ATCGAGGTCG AGATCGACGC GCTGCCCGGC GTGGTCGAAT CCGCGGTGAT CGGCCTGGCC
CATCCCGATT TCGGAGAGGG CGTCACGGCG GTGGTGGTGC CGGGCGAGGG CGCACCCGAC
GAGGCGGCGG TCCTCGCGGC GCTGGAAGGG CGGCTCGCCA AGTACAAGTG TCCCAAGCGG
GTTCTGTTCA CGGCCGAACT GCCGCGCAAT GCCATGGGCA AGGTGCAAAA GAACCTTCTG
CGCGAGACCC ACGCCGACCT CTACCGCGGC TGA
 
Protein sequence
MAEPIVNHLF GLVRTHCPAD PGAKVFIETS DGARYTYADL LARSGAYASA LRALGVKPGD 
RVAVQVEKSA EVIFLYLGAV RAGAVFLPLN TAYTGPEIAY FLGDAEPALF VCDPAREADL
SAVAGQAGVP QTRTLDASGR GSMAQAADAA SPDFADVPRG ADDLAAILYT SGTTGRSKGA
MLSHDNLASN ALTLAQYWHF TERDVLIHAL PVFHTHGLFV ATNIVLATGG TMLFLPRLDA
KKILELMPRA TAMMGVPTFY TRLLKEPGLT REAAARMRLF VSGSAPLLAE THREWAQRTG
HAILERYGMT ETNMNTSNPY EGARRAGTVG FPLPGVTLRV VDPETGAPLG PEEVGMIEVK
GPNVFQGYWR MPEKTAAELK VDGFFITGDL GKIDRDGYVH IVGRGKDLII TGGYNVYPKE
IEVEIDALPG VVESAVIGLA HPDFGEGVTA VVVPGEGAPD EAAVLAALEG RLAKYKCPKR
VLFTAELPRN AMGKVQKNLL RETHADLYRG