Gene Mext_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0870 
Symbol 
ID5832807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp947485 
End bp948528 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content70% 
IMG OID641366652 
Producthypothetical protein 
Protein accessionYP_001638346 
Protein GI163850303 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0477491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGA CTCCGGCTTG CTCTACGGCC TCGATCGAGG CCGGAGACCG GGAGAGAGTC 
GTGTCCGCCA AACAGGTCGG CGAGACGGAA CGCGCGATCG CCCGCGATCC GCGACGCCTC
GTCGGCATCG CCCTGATGTG CATCGCCCCG GTCTTCTTCG CCAGCCTCGA TGCCACGGGC
AAGGTACTCG CGGGTGCGGG CGTCGATCCG CTGCTCACCA CCTTCATGCG CTACGCCGTC
AACGTTGCGC TGGTGACCGC CTTGATCAAC CCGGTGACAC GGCCGGGCGT CGCCCATTCG
CGGCGCCTGC CGCTCCAGAT CCTGCGCTCG CTGCTGCTGT TCGGCTCGAC CGCCTGCAAC
TTCCTGGCCC TGCGCTCGCT CCAGCTCGCG GAAACGATCT CGATCCAGTT CGCCGCGCCG
CTCACCGTGG CGCTGCTCGC CGGGCCGCTG CTCGGCGAAT GGTCGTCGCG GATGCGGCTC
GCGGCGGTGG CGACGGGCTT CGTCGGCGTC CTCGTCATCG TGCGGCCGGA CGCGCTGGCG
GCCAAGCCGG CGATCCTGTT CAGCCTCGGT GCGATGCTCT GCTACGCAAT CTACGTCATC
GTGACGCGCA AGCTTGCGGC TCACGATTCG ACGGCCACGA CGGTGTTCTA CACCGGGCTC
GGCGGGCTCG CGGTGATGAG CCCGCTCCTG CCGTGGATCT GGACGGCACC GGCCTCGGGC
ACGGTCTGGG CGCTGCTGGT CGCGGTCGGA CTGTTCGGCA CGATCGGGCA CTGGCTGCTG
GTGCTGGCCC ATGCGCGGGC GCCGGCGAGC CTGCTCGCGC CCTTCATCTA CACGCAGATC
CTGTGGTCGG TCCTGCTCGG CTACCTGCTG TTCGGCGACG TGCCAAGCGC CTGGACGATG
CTCGGTGCCG GCATCATCGT CGCCTCGGGC CTCGCTCTGC TGAGCGAGGA TGCCCTGATG
CGCCGACATG CGCGGCGGAG GCAGACCCCT CCCCCGCGCA TGGCCACACG CACTCAGCGG
TGGCGGTGGT GGCGCGGATG GTAA
 
Protein sequence
MRWTPACSTA SIEAGDRERV VSAKQVGETE RAIARDPRRL VGIALMCIAP VFFASLDATG 
KVLAGAGVDP LLTTFMRYAV NVALVTALIN PVTRPGVAHS RRLPLQILRS LLLFGSTACN
FLALRSLQLA ETISIQFAAP LTVALLAGPL LGEWSSRMRL AAVATGFVGV LVIVRPDALA
AKPAILFSLG AMLCYAIYVI VTRKLAAHDS TATTVFYTGL GGLAVMSPLL PWIWTAPASG
TVWALLVAVG LFGTIGHWLL VLAHARAPAS LLAPFIYTQI LWSVLLGYLL FGDVPSAWTM
LGAGIIVASG LALLSEDALM RRHARRRQTP PPRMATRTQR WRWWRGW