Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0816 |
Symbol | |
ID | 5833178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 887730 |
End bp | 888974 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641366598 |
Product | capsule polysaccharide export protein-like protein |
Protein accession | YP_001638292 |
Protein GI | 163850249 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3524] Capsule polysaccharide export protein |
TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.671336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.554502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG AGATCAGCAG TCCGAACAGC GCAGCGGTGA CCACCGCCGA CCGCTCGACC GCGGTCACGG AATCGCTCAA GCGGTTTGCC CGCATCGCGC GCCAGTCCGA CCACAAGAAG GGCATTCGCG CCTATCAGAC GCATGTCCGG CGCGATCCCT GGATCCCCGC CTTCTTCGTG CTTCTGTTCC TGCTGCCGAC GATGGTCACC GCCGGCTATT TCTATCTTAT CGCCTCCGAC CGCTACATCA CCGAGGCACG CTTCGCCCTG CGCCCGGCGC TCGGTAACGT CGACAAGGTG CAGAGTGAGG AAACGGGCAA CAACAGCTCT CTGTCCAAGC AGATGATCGC TCAGGACACG CTGATCACGA CAAGCTACAT CGCCAGCCGG CAGATGATCG AGACCATGGA GCGGCAAATG CCGCTTCGCG AGATGTTCTC GCGGGACGGC ATCGACTTCT TCTCGCGCTT CGACGCCAGC GAGCCGATCG AGCGGTTCAT GCTCTACTGG CACAAGCGCG TGACGACCTC GGTCGATTCC AATGGCGGTA TCATCAGCCT GAAGGTCGCC GCCTTCGACC CGCAGGAATC CTACACGCTG ACCCGCGCGC TTCTGGACGA GAGCGAGCGC ATGGTGAATG AACTCAGCCT CAAGGCGCGC AACGCCGCGC TGGCTGAGAG CACCCGCGAA CTCAAGAACG CCGAAGAGCG CCTGCTCACC GTCCAGCGTG CCATGCGCGA CCTGCGCAAC CGCGCCGGCA TTCTCGATGC GCAATCGGCC AACAAGAACA ACCTCACGGT CATCGCGGAG CTGCGCAAGA AGCGCATCGA CCTGTCGGTG CAGCTCAACC AGAGCCTGCG CGACCTCGCG CCGGAGCGGC GTCCGATCCA GGATTTGAAG GCGCAGATCC AAGATCTCGA TGACAACATC GAGAAGATCG AACGGCAGAT GACCAGCACC GATCCGGATC AGCGACGCCT GCTGTCGGAG GCGATGACGG AATTCGAGGG GCTGGAGAAC GAGCGCAAGA ACGCGCTCCT CTATCATAAC AAGGTGTTGG CCGCGAGCGA GCAGGCCCGC ATCGTCGCCA ACCGTCAGAT CGAGTTCTTC ACCCCCGTGG TCAATCCGGT CGTGCCCACA TCGGCGATCG AACCGCGCAA GCACCTGATC ACGAGCATCG TCGCGCTCGT GGCCATGGCT TTGTTCGGCT TCAGCGTCCT GATCCGGAAG TATCTCTATA GCTGA
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Protein sequence | MSTEISSPNS AAVTTADRST AVTESLKRFA RIARQSDHKK GIRAYQTHVR RDPWIPAFFV LLFLLPTMVT AGYFYLIASD RYITEARFAL RPALGNVDKV QSEETGNNSS LSKQMIAQDT LITTSYIASR QMIETMERQM PLREMFSRDG IDFFSRFDAS EPIERFMLYW HKRVTTSVDS NGGIISLKVA AFDPQESYTL TRALLDESER MVNELSLKAR NAALAESTRE LKNAEERLLT VQRAMRDLRN RAGILDAQSA NKNNLTVIAE LRKKRIDLSV QLNQSLRDLA PERRPIQDLK AQIQDLDDNI EKIERQMTST DPDQRRLLSE AMTEFEGLEN ERKNALLYHN KVLAASEQAR IVANRQIEFF TPVVNPVVPT SAIEPRKHLI TSIVALVAMA LFGFSVLIRK YLYS
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