| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0605 |
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| Symbol | |
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| ID | 5834999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 664107 |
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| End bp | 665429 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641366388 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_001638090 |
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| Protein GI | 163850047 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.14254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0463062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGCT CGTACGAGCG GACCCGCTTC TATCGAAGCA CATGGTGCCA GTTCCTGCGG
GCAGACCCGT GGAAGGCACG TTTTTCGATG TCAGACCTGC TGACCTCCCC GATCGGCCAG
CGCCGCAGCC TCGCGATACG GCCGCGCGCG GCGGAGTTGC CGCAGCGTGC CGACGTCGCC
GTGGTCGGCG CGGGGCTGAT CGGCCTGTCG ATCGCGTGGC GGCTGGCGCA GGCCGGCCGC
TCGGTGGCCG TGGTGGAGCG CGGTAGCGTC GGCAGCGGTG CGAGCCTCGC CGCGACCGGC
ATGCTAGCGC CGGCCGCCGA GCACGAGCCG GGCTCCGATC TGCTGTTGCC GCTTGCGCTC
GAATCCCTGC GCCGCTGGCC GGCTTTCCGC GATGCGCTCC AGGCGGCCTC GGGCCGCGAG
ATCGATTACC GCGAGGACGG CACCCTCGTG ATCGCCATCG GCCGCGACGA GGTGGAGCGC
CTGCGCTTCC GTCACGACCT GCAGCGCCGC TCGGGCGTCG CCGCCGAATG GCTGTCCGGC
CCGGAGGTGC GCGCGCGTGA GCCGCTGCTG CGCCCTAACG TCACCGCCGG CATCCTTTGC
CCCCTCGACG CGCAGGTCGA TCCGCGGCTC GTGATGGAAG CGCTGCTGTG CGCCTGCGAG
GCGGCCGGCG TCGTCATCAG CGAGGGCGTC GCGGTCGACG GCCTGGAGCG CCGGGGCGGG
CGCGTCACCG GCCTGCACGC CGCTGGCCGC ACGCTCACCG CCGACACGGT GATCCTGGCC
GCCGGCGCCT GGAGCGGCGA TGCGAGCCTG CTTCCCAGCG ACTTGGACGT GCCCGACCTG
TCCGTGCCGG TCCGGCCGCT CAAGGGGCAG TCGCTGGCCC TGCGCACGAC CAAGCGCACA
GGCACCCTCT CCCGCATGGT GTGGACCGAC GCGGTGCATA TGGCGCCGAA GGGCGACGGG
CACCTCATCG TCGGCGCCAC GGTGGAGGAT TGCGGCTTCA CCAGCGGTGT CACCGCGGGC
GGCATGTTCG CCTTGCTGGA GGGCGCGCGG CGGGTTCTGC CCGGTATCGA GGAAATGGAG
ATCGACGCGG TCTGGAGCGG CTTCCGCCCG ACCTCGGACG ACGACGCACC GATCATCGAG
GAGGCCGCAC CCGGCCTCGT CCTCGCCACC GGCCATCACC GCAACGGTTA CCTGCTCGCC
CCCGCCACCG CCGACGCCGT GGCGACGCTT CTTACCGAGG GCGCGCTGCC GGACTTCGCC
CGCGGCTTCG GACGGGCGCG CTTCTCGTCA TCGCATCAAA CCGGAGGGAG GGCCGTGGCA
TGA
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| Protein sequence | MGRSYERTRF YRSTWCQFLR ADPWKARFSM SDLLTSPIGQ RRSLAIRPRA AELPQRADVA
VVGAGLIGLS IAWRLAQAGR SVAVVERGSV GSGASLAATG MLAPAAEHEP GSDLLLPLAL
ESLRRWPAFR DALQAASGRE IDYREDGTLV IAIGRDEVER LRFRHDLQRR SGVAAEWLSG
PEVRAREPLL RPNVTAGILC PLDAQVDPRL VMEALLCACE AAGVVISEGV AVDGLERRGG
RVTGLHAAGR TLTADTVILA AGAWSGDASL LPSDLDVPDL SVPVRPLKGQ SLALRTTKRT
GTLSRMVWTD AVHMAPKGDG HLIVGATVED CGFTSGVTAG GMFALLEGAR RVLPGIEEME
IDAVWSGFRP TSDDDAPIIE EAAPGLVLAT GHHRNGYLLA PATADAVATL LTEGALPDFA
RGFGRARFSS SHQTGGRAVA
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