| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0551 |
|---|
| Symbol | |
|---|
| ID | 5833536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 600473 |
|---|
| End bp | 601750 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641366328 |
|---|
| Product | Fmu (Sun) domain-containing protein |
|---|
| Protein accession | YP_001638037 |
|---|
| Protein GI | 163849994 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.481855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACCC TGCTCGGTCC CGCCCGCGGC CTGGCGCTCG AGGACGCGCT CGCCCAGGCC
GCCCGCGGCG CGGGGTTGGA TGCGGGGGAA GCCGCGCTTG CCCGGGCGAT CGCCACGGCG
AGCTTCCGCC GCCTCGGCTT CATCAAGGCG GCGCTCGCCG CCCGCCTACG GGACGGCTTG
CCGGAAGACC GGCCCCACCT CCTCGCCTTG CTGGTGACGG GCGCGGCGCA GATCCTCGAT
CTGGCGGTGG CCGACCACGC CGCCGTCGAT CTCTCGGTGC GCCTCGCCAA AGCCGATCCG
CAGCTCCAGC ACCTCGTGCC CCTCGTCAAC GCCGTTCTGC GCCGGATCGC GCGCGAGCGT
GACGCGATCC GGGCGCAGGA GAGCGATCCG CTCGCCCACA ACACCCCGGA CTGGCTCGCC
CGGCGCTGGC AGGCCGCCTA CGGTGAGGAG GCGGCGCGTC GGATCGCCGT CGCGCATCTC
GAAGGCGCGG CCGTCGATCT CACGGTTCCG CACGATCCCG ACATCTGGGC CGAGCGACTC
GGGGGCATCC GGCTCGATCT CGGATCGGTG CGGCTGGCCG AGGTGCGGCA GGCGGTGGCC
GAGCTTCCCG GCTACGCCGA GGGCGCATGG TGGGTCCAGG ATGCCGCCGC CGCCCTGCCG
GTGCGGCTTC TCGCGCCGGT CTCGGGCGAG CGCGTCGTCG ATCTCTGCGC AGCACCCGGC
GGCAAGACGG CCCAGATAGC CGCCGCCGGC GCCGCGGTCA CCGCGGTGGA CCGTTCGGCC
GTGCGGCTGG AACGCCTCGG GCGGAACCTC GAACGCCTCG GCCTCTCCGC CGAAGTGGTC
ACCGCCGATG CCCTCGCTCT GCCGGAGGAC GCGCCCTTCG ACGCGGTGCT GCTCGATGCG
CCCTGCTCGG CGACCGGCAC GATCCGTCGC CATCCCGATG TCGTCTGGAC GAAGAGCGAG
GCGGACGTGA TCCGCTTGGC CGGCCTGCAG CGGCGCCTGC TCGACAAGGC CGCGCGGCTG
ACGCGGCCCG GCGGTCGCTT GGTCTACTGC ACGTGCTCCC TTGAACCCGA GGAAGGCAGC
GCACAGGTGG CGGCGTTCCT GGCCCGCAAT CCGGATTTCG AGCGGATCGC GATCACGCCC
GACCGGTTAT CCGGCCATGC CGAGCTGATC GACGCCTCGG GCGACCTGCG CACCCTGCCC
TCTCACGTCG TGGGCGGCAT TGGGCGGGCG GGTGGCCTCG ACGGGTTCTA CGCGAGCCTT
CTGCGGCGGC GCGACTGA
|
|---|
| Protein sequence | MATLLGPARG LALEDALAQA ARGAGLDAGE AALARAIATA SFRRLGFIKA ALAARLRDGL
PEDRPHLLAL LVTGAAQILD LAVADHAAVD LSVRLAKADP QLQHLVPLVN AVLRRIARER
DAIRAQESDP LAHNTPDWLA RRWQAAYGEE AARRIAVAHL EGAAVDLTVP HDPDIWAERL
GGIRLDLGSV RLAEVRQAVA ELPGYAEGAW WVQDAAAALP VRLLAPVSGE RVVDLCAAPG
GKTAQIAAAG AAVTAVDRSA VRLERLGRNL ERLGLSAEVV TADALALPED APFDAVLLDA
PCSATGTIRR HPDVVWTKSE ADVIRLAGLQ RRLLDKAARL TRPGGRLVYC TCSLEPEEGS
AQVAAFLARN PDFERIAITP DRLSGHAELI DASGDLRTLP SHVVGGIGRA GGLDGFYASL
LRRRD
|
|---|
| |