Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0543 |
Symbol | |
ID | 5833755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 592227 |
End bp | 594587 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641366320 |
Product | PAS sensor protein |
Protein accession | YP_001638029 |
Protein GI | 163849986 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0831512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGGG CGGTGTCCGC GTCCCTGTCC GCGCGCGCAC GCGCGGACAC GATCCTCGGG ATCCAACGTA CGACCGGCAC TGCCCAGGCC CGCCTCATCC GGGCGGAGAC GTGGCTTCGC TACGCGCTTC CGGCTCTGCT CGTCGTCTTC ATGCTCACGC TGCTGGGCGT GGCGGCCCTG CAGATGCGCG GGCGCCACGA CGAGGCGATG CGCGTGGCCA CCCGCGAGGT GGAGGCCTTC GCGCGTCTCT CCGCGCTCGC CCTGTCGAAC GCATCGTCTG CCGCTGAGAC GCGGCTCGAG CGTGTGCTGC CGGTCCATCT CCTGCCGACC GGCCGCGAGG TTCTGGTGAT CGGCCCCGGC GGCCGGATTC GTGCTGCCTA TCCCGCGCCC GCCCCGGCCG AAACCTTCGC CGGGTATCTC GCCGACGGTG AGCCCATCGC CATCCTCGGC GAGAGTGCCG GGGCAATGAC GGTGAATCTC CAGGCCGGCG GACAGGCGGT CGTCGCAGCA CGCCGCCTGT CCCACGGGAT GGGCGAAGTC GCGGTCGTCC AGAGGTTCGA GCCGCTGGCC GACAATTGGT GGCGGATGTT CGGCCACCAC GCGGTCTCCC TTTCGGCCAT CGCCCTGGTG CTGGCGGGCA TGGCCACCGC CTACATCCTG CAGACGCAGC GGGCGCAGGC GGCGGACGAG GTCTGCGATC TCGTCAAGCA GCGCCTCGAC ACGGCGCTCG GCCGCGGCCG CTGCGGCCTC TGGGACTGGG ACATCGCCCG CGGCACGATC TTCTGGTCGG ACTCGATGTA CGCCCTGCTC GGCTACACGC CGGAAAAGGA TCTGCTCTCC TTCGGCGACG TGAACGCGCT GCTGCACGCC GAGGACGGCG ACCTCTACAG CCTTGCCCGC CACCTCGCCG CGAGCCACGC GACCGTCGAT CACGAGTTCC GCATCCGCGA CGCGTCCGGC GAATGGATCT GGCTGCGCAC CCGCGCCGAA ATCGTCGAGG ATGCGGTCGA CGGCAGCCGC CATCTCGTCG GCATCGCCAT GGACGTGACC GAGCAACGCC GCCTCGCCGA GTTCACCGCC ACCGCCGACA TGCGCCTACG CGACGCGGTG GAGGCGGTCT CCGAAGCCTT CGTGCTGTGG GACGCCAGCA ATCGGCTGGT GCTGTGCAAC TCGAAGTTCC GCGACCTGCA CGCCCTGGCG AGCGAGGATG CGGTGCCCGG CCGCCGCTAC GACGAGATCA TGGGACGGGG CGCCCTCCCC CCCGTGCGCC GGGGCATTCC GGGTTCGGAA CGCGGCCCCT CGCGTACCTT CGAGGTGGAG TTGACGGACG GACGCTGGCT CCAGGTCAGC GAGCGGCGGA CCAAGGACGG CGGTTACGTC TCGGTCGGCA CCGACATCAC CAGCCTCAAG CGCCACCAGG AGCAGCTGGT CACGTCGGAA CGCGAGCTGA TCGAGACGGT CAAGGATCTC AAGCGGTCCC GTCGCACCCT GGAAACCCAG ACGCAGCAGC TCGCCGACCT CGCCGAGCGT CATCTCGACC AGAAGGCCCG CGCCGAGATC GCCAATCAGG CCAAGTCCGA GTTCCTGGCC AATATGAGCC ACGAGCTGCG CACGCCGCTC AACGCCATCA TGGGCTTTGC CGAGCTGATG GAGAGCGAGG TCTACGGATC GCTCGGCTCA CCCCGCTACG CCGATTATTG CCGCGACATC CAGCAGAGCG GCACCTACCT GCTCTCGGTC ATCGACGACA TCCTGCACAT GTCGCGCATC GAGGCGAAGC GGGTGAAGCT CGTGCGCCGC GACATCGACC TTGGCACGGC CCTGACCTCC GCGTTGACGC TGGTCGCCAA GGAGGCGGCG AGCAAATCCG TCTCCATCGA TCTCGAACTG GCCGGCACCC TGCACGTGCT GGCCGACGAG CGGGCGCTCC AGCAGATCCT GCTCAACATC ATCCAGAACG CTGTGAAGTT CACCCCGGAG CGGGGCCGCA TCGCCCTGCG CGGCCGCTCC TGCAACGGCT TCGTCCACCT GTTCATCGGC GATACCGGAA TCGGCATCCC GAAGACGGCG ATCTCCAAGC TCGGCCGGCC GTTCGAGCAG GTCGAGACCA ACCTGACCCG CAGCTACAAG GGCTCCGGCC TCGGCCTCGC CATCGCCCGT TCCACCGCGG AGCTGCATGG CGGGTCGCTG CGCATCCGCT CCGAGGAAGG GATCGGCACC CTGGTGCTGG TGCGCCTGCC GATGCCGACG CCCGAGCGCC TCGCAGAGGT CGCACGGGAG GCCGAGCGGG ACACGCTCAA GGCGATCGGC GACATGCCCG GCGTGGCCCG GACTGAGGGC GACAGAATCG CGGCCCTCTG A
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Protein sequence | MSGAVSASLS ARARADTILG IQRTTGTAQA RLIRAETWLR YALPALLVVF MLTLLGVAAL QMRGRHDEAM RVATREVEAF ARLSALALSN ASSAAETRLE RVLPVHLLPT GREVLVIGPG GRIRAAYPAP APAETFAGYL ADGEPIAILG ESAGAMTVNL QAGGQAVVAA RRLSHGMGEV AVVQRFEPLA DNWWRMFGHH AVSLSAIALV LAGMATAYIL QTQRAQAADE VCDLVKQRLD TALGRGRCGL WDWDIARGTI FWSDSMYALL GYTPEKDLLS FGDVNALLHA EDGDLYSLAR HLAASHATVD HEFRIRDASG EWIWLRTRAE IVEDAVDGSR HLVGIAMDVT EQRRLAEFTA TADMRLRDAV EAVSEAFVLW DASNRLVLCN SKFRDLHALA SEDAVPGRRY DEIMGRGALP PVRRGIPGSE RGPSRTFEVE LTDGRWLQVS ERRTKDGGYV SVGTDITSLK RHQEQLVTSE RELIETVKDL KRSRRTLETQ TQQLADLAER HLDQKARAEI ANQAKSEFLA NMSHELRTPL NAIMGFAELM ESEVYGSLGS PRYADYCRDI QQSGTYLLSV IDDILHMSRI EAKRVKLVRR DIDLGTALTS ALTLVAKEAA SKSVSIDLEL AGTLHVLADE RALQQILLNI IQNAVKFTPE RGRIALRGRS CNGFVHLFIG DTGIGIPKTA ISKLGRPFEQ VETNLTRSYK GSGLGLAIAR STAELHGGSL RIRSEEGIGT LVLVRLPMPT PERLAEVARE AERDTLKAIG DMPGVARTEG DRIAAL
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