Gene Mext_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0420 
Symbol 
ID5835850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp464017 
End bp465084 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content71% 
IMG OID641366204 
Productriboflavin biosynthesis protein RibF 
Protein accessionYP_001637913 
Protein GI163849870 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0196] FAD synthase 
TIGRFAM ID[TIGR00083] riboflavin kinase/FMN adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.506941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCTG CCGACAATCC CTTAAGACTC GCAGACATTC GATCGCAGGA GCCGATGCCC 
TCAGGCGATG AGAACGCGGT GCCGCCCGCC GGGACCGGCC TCCGCCCCTC TTCGAGACCC
TTCACGGTCT GCCGCGAGGA CGACCCGGTG CCTCCGGCGC TGGCGGGTGC CGTCGCCGCG
CTCGGGAACT TCGATGGCGT CCATCGCGGC CACCGCACGC TGATTGAGGC GGTGCGCACC
GAGGCCGGGT CACACCCTGC CGCCGTGCTG ACCTTCGAGC CGCATCCCCG CGCCTTCTTC
GCACCCGACC AGCCGATGTT CCGTCTCACC GGCCCCAGCG CCAAGGAGAT CGTGTTCGCG
CGCCTCGGTC TCGACGGTCT GATCGTGCGC CGGTTCGATG AACGGCTTGC CGGCACCAGC
GCCCGGGATT TCGTGGAGGG CTGGCTGCGT GACGGGCTCG GCCTGTCCGG CGTGGTGATC
GGCCACGATT TCCATTTCGG CCGCGGGCGC GAGGGCTCGC CGGGGACGCT CGCCGAGCTG
TGCGCCGAGG CCGGTCTGTC CTGCCGGATC GTCCCCGCGG TCTCGGCCGA TCCCGGCGAT
GCGCCGATCT CGTCGAGCGC GATCCGCGCT GCCCTCGCAT CGGGCGACGT GGCGCGGGCC
AACGACCTCC TCGGCTATCG CTGGTTCGTG CTGGCCCAGG TGCGCCACGG CGACAAGCGC
GGACGCACCT TGGGCTACCC CACGGCCAAC CTCGCCCTCG AATCCTGCGG GCTCGCCCAC
GGCATCTACG CGGTGCGGGT GCGCTTGGCC GACGGCAGCC TGCACGACGG CGTGGCGAGC
TACGGCCGCC GACCGACCTT CGACGACGGC GCGCCGCTCC TCGAGGTGCA CCTGTTCGAC
TTCAAGGGCG ATCTCTACGG GCAGGAGGTC GCCGTCGAAC TGCTGGCTTA TCTGCGCGGC
GAGGAGAAGT TTTCGAGCGC CGAGGCGCTG ATCGCGCAGA TGGACGTCGA CTCGGCTCGG
GCCAAGGCGG CCATCCGCAC GGATCGCGTG CCGTCGATGC TAGGCTAA
 
Protein sequence
MLPADNPLRL ADIRSQEPMP SGDENAVPPA GTGLRPSSRP FTVCREDDPV PPALAGAVAA 
LGNFDGVHRG HRTLIEAVRT EAGSHPAAVL TFEPHPRAFF APDQPMFRLT GPSAKEIVFA
RLGLDGLIVR RFDERLAGTS ARDFVEGWLR DGLGLSGVVI GHDFHFGRGR EGSPGTLAEL
CAEAGLSCRI VPAVSADPGD APISSSAIRA ALASGDVARA NDLLGYRWFV LAQVRHGDKR
GRTLGYPTAN LALESCGLAH GIYAVRVRLA DGSLHDGVAS YGRRPTFDDG APLLEVHLFD
FKGDLYGQEV AVELLAYLRG EEKFSSAEAL IAQMDVDSAR AKAAIRTDRV PSMLG