| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0319 |
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| Symbol | |
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| ID | 5832690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 355706 |
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| End bp | 358813 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641366104 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001637814 |
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| Protein GI | 163849771 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0134136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATG GCCCGATGTC TGCTCCGCGC TTTCAGGCCG CCTACGCCCC GGATGATGCT
GCTTTGGCGG AGGCATTGCT GCGTGAGGCA CCCCTGCCGG CGGCCACGGA GGCGGCGGTC
GATCGGCTCG CGGCCGACCT GATCGGCGCG ATCCGCGCGG ATGCCAGCCA CGGCGCCGTC
GAGGCGTTGC TGCGGGAATA TGCGCTGACG ACCCGCGAAG GGCTTGCCCT CATGACCCTC
GCCGAGGCGC TGCTGCGGGT GCCCGATGCG GCCACCGCCG ACCGGCTGAT CGCAGACAAG
CTGCGCGAGG GCGATTTTGT CCATCACGCG GTGCGTTCGG AGAGCGGCCT CGCCCATGCC
GCGTCCTGGG CGCTTGGCCT CGGCGCCCGG CTCGTCGGCC CACAGGACAC CCCCGAGGCG
ACCTTGGGAA GCATGGTCCG CCGCCTCGGC CGCCCGGCCG TACGCGCGGC GGCCCACCGT
GCGATGCGGG TGATGGGCGG GCAATTCGTG TTGGCCGAAG AGATCGGCGC GGCGCTCAAG
CGAGCCGGCT CGGGCACTGC CCGCCGTTCC CGCTTCTCCT TCGACATGCT CGGCGAGGGC
GCCCGCACGG CGGACGACGC CGAGAGCTAC CGCCAGGCCT ATGCCCGCGC CATCGCCCGG
ATCGGGCGGG AAGCCGGCAA CGCCCCGCTC CCGGCCCGGC CAGGCATCTC GGTGAAGCTC
TCGGCGCTGC ATCCGCGCTA CACCCCGACG CAAGGGGCGC GAGTGATGGC CGAACTGGTG
CCGGTGGTGC GCGACCTCGC CCGCGACGCC CGCGCGCATG ACCTCAACTT CACCCTCGAC
GCCGAGGAGG CGGAGCGGCT CGAACTCTCC CTCGACGTGT TCGAGGCCGT GCTGGCCGAT
CCGGCTTTGG CCGGCTGGGA CGGATTCGGC CTCGCGATTC AGGCCTATTC GAAGCGTTGC
CTTCCCGTGA TCGACTACAT CGCAGAACTC GCCGAGCGGT ACGACCGGCG GCTGATGGTG
CGCCTCGTCA AGGGCGCCTA CTGGGACACG GAAGTGAAGC TCGCCCAGAC GCAAGGGACG
GTCGACTACC CCGTCTTCAC CCGCAAGGCG ATGACGGACC TGAACTATCT GGCTGCCGCC
CGGCGGCTGC TGGCGCTGCG CCCGCGCCTC TACCCGCAAT TCGCGACGCA CAACGCGCAG
ACCGTGGCGA GCGTGCTCGG TCTGGCCGGG CTGCTCGATC GTCCCGCGGA CGAGGAGGCC
GGCTTCGAGT TCCAGCGCCT GCACGGCATG GGCGAGGCGC TCTACCAGCG GCTCACCGAG
CGGGCGCCGG GCGTCGGCCA GCGGGTCTAC GCGCCCGTCG GCGGCCACCG CGAGTTGCTC
GCCTATCTCG TCCGCCGGCT GCTGGAGAAC GGGGCGAACT CCTCGTTCGT AGCCCGCGCC
GCCGATCCCT CGGTGCCGGC GGCCGAACTG CTGGCCCGGC CTCAGGCCCT GGTGGAGACG
CCGTCGCAGG CCCGCCACCC CAAGATCCCG CTGCCGCGCG ACCTGTTCGG GCCTGAGCGC
CGCAATTCTC CGGGGCTCGC CTTCGGCGAC GGCGCTGCGC TGCGACGGTG GACCGATGCC
GTCGCGCGGG CCGCCGGCCC CGCCGAGGCC GCGCCGATCA TCGACGGCGC CGTCCAGACC
GGCCGCGCCC GCCCGGTGAA CAGCCCCATC GACGGCGCGG CCCTCGGTAG CGTCATCGAG
GCGGACCCCG CCACCGCCGC GCTCGCCATG GAGGCGGCCG CGCGCGGCTT CCCCACCTGG
GCCGCGACGC CCGCCCGCGA GCGTGCCGCC TGCCTGGAAC GGGCGGCCGA CGCCTTCGTG
CGGGAGCAGG GACGGCTCCT GCACCTGCTG CAAGCCGAGG CCGGCAAGAC CCTCGACGAC
GCCGTGGCCG AGTGGCGCGA GGCGATCGAC TTCCTGCGCT ACTACGCGGC GCAGGGCCGG
GATCTGTTCG GCGAACCGCA GGACCTGCCC GGCCCGGCGG GCGAGGCTAA CAGCTTGCGC
CTCGTCGGCC GGGGCGTGTT CGTCGCCGTC TCGCCCTGGA ATTTCCCGCT CGCGATCTTC
ACCGGGCAGG TCGCGGCGGC GCTGATGGCC GGCAACGCCG TCGTCGCCAA GCCTGCGCCG
CAGACGCCGC TGGTGGCGGA CCTTGCCGTG CGCCTGCTCC ATGCAGCCGG CGTTCCGGGG
AGCGCCCTTC ACCTCGTCCC CGGCGGTCCG GAGACCGGCG CCGCACTGAT CGAGCATCCC
GCTCTGGCCG GCGTCGTCTT CACCGGTTCC ACCGCGACGG CGCAGCGGAT CAACCGGGCG
CTCGCCGCCC GCGACAGCGC GATCCTACCG CTGATCGCCG AGACCGGCGG CATCAACGCG
ATGATCGTCG ATGCCACGGC GCTTCCCGAG CAGGTGGCCG ACGACGTGGT GGTCTCGGCT
TTCCGCTCCG CCGGCCAACG CTGCTCGGCC CTGCGCCTGC TCCTCGTGCA GGAGGATGTC
GCCGACCGGA TGATCGCGGC CGTGGCCGGG GCGGCGCGGG AGCTGACGGT CGGCGACCCC
CGCGATCTGG CCACCGATCT CGGTCCGGTG ATCGACGCGG GCGCCAAGCA ACGGCTCGAC
GCGCATATCG CGGCCATGAC CACCTCGGCG CGGCTGCACT ATGCCGGTGC GGCGCCGGGC
GGCCTCACCG TGGCACCTCA TATCTTTGAA ATCGGCGGCG TCGCCGACCT ACGGGAGGAG
GTGTTCGGGC CCATCCTCCA TGTCGCCCGA TACCCGGCGG ACGGCCTTGG CTCGGTCCTC
GCGGCGATCC GGGCCGGCGG CTACGGGCTC ACCCTCGGCA TCCATTCGCG GATCGAGGAA
ACCGCCGAGC GCATCGCCGA GGCCCTGCCG CACGGCAACG TCTACGTGAA CCGCAACATG
ATCGGCGCCG TCGTCGGCAG CCAGCCCTTC GGCGGCTCCG GCCTGTCGGG CACCGGCCCG
AAGGCCGGCG GTCCCCATTA TCTCGCCCGC TTCGCCATGG AGCGGACGCT CACCGTCAAC
ACCGCCGCGG CGGGCGGCAG CGTCGGCCTC ATCACCCTGG AGGGGTGA
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| Protein sequence | MTDGPMSAPR FQAAYAPDDA ALAEALLREA PLPAATEAAV DRLAADLIGA IRADASHGAV
EALLREYALT TREGLALMTL AEALLRVPDA ATADRLIADK LREGDFVHHA VRSESGLAHA
ASWALGLGAR LVGPQDTPEA TLGSMVRRLG RPAVRAAAHR AMRVMGGQFV LAEEIGAALK
RAGSGTARRS RFSFDMLGEG ARTADDAESY RQAYARAIAR IGREAGNAPL PARPGISVKL
SALHPRYTPT QGARVMAELV PVVRDLARDA RAHDLNFTLD AEEAERLELS LDVFEAVLAD
PALAGWDGFG LAIQAYSKRC LPVIDYIAEL AERYDRRLMV RLVKGAYWDT EVKLAQTQGT
VDYPVFTRKA MTDLNYLAAA RRLLALRPRL YPQFATHNAQ TVASVLGLAG LLDRPADEEA
GFEFQRLHGM GEALYQRLTE RAPGVGQRVY APVGGHRELL AYLVRRLLEN GANSSFVARA
ADPSVPAAEL LARPQALVET PSQARHPKIP LPRDLFGPER RNSPGLAFGD GAALRRWTDA
VARAAGPAEA APIIDGAVQT GRARPVNSPI DGAALGSVIE ADPATAALAM EAAARGFPTW
AATPARERAA CLERAADAFV REQGRLLHLL QAEAGKTLDD AVAEWREAID FLRYYAAQGR
DLFGEPQDLP GPAGEANSLR LVGRGVFVAV SPWNFPLAIF TGQVAAALMA GNAVVAKPAP
QTPLVADLAV RLLHAAGVPG SALHLVPGGP ETGAALIEHP ALAGVVFTGS TATAQRINRA
LAARDSAILP LIAETGGINA MIVDATALPE QVADDVVVSA FRSAGQRCSA LRLLLVQEDV
ADRMIAAVAG AARELTVGDP RDLATDLGPV IDAGAKQRLD AHIAAMTTSA RLHYAGAAPG
GLTVAPHIFE IGGVADLREE VFGPILHVAR YPADGLGSVL AAIRAGGYGL TLGIHSRIEE
TAERIAEALP HGNVYVNRNM IGAVVGSQPF GGSGLSGTGP KAGGPHYLAR FAMERTLTVN
TAAAGGSVGL ITLEG
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