Gene Mext_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0280 
Symbol 
ID5832597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp315058 
End bp315759 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID641366064 
ProductHAD family hydrolase 
Protein accessionYP_001637775 
Protein GI163849732 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCAAGC TGATCGTCTT CGACGTCGAT GGCACCCTCA TCGACAGCCA GCACCTGATC 
GTGGAGGCGC AGCACCGCGC CTTCTCCGAG CATGGCTTGG CAGCGCCGCC GCGCAAGGAG
GCGCTGTCCG TGGTCGGGCT GTCCCTGCCG GAAGCATTCC GTCGCCTCGT CGGCGAGGCC
GGGCCGATCG AATCGCTCGC GCATAGCTAT CGCAAGGCAT TCCAGGCGTT GCGGGTCGAT
CCCGATTATG AAGAGCCGCT GTTCCCAGGC ATGGCCGAGT TGGTCGAGCG GCTGCACCGC
CGCGACGACA TCCAGCTCGG CATCGCCACC GGCAAGTCGC GCCGGGGCGT CAATCATCTC
GTGGACAAGT ACGGCTGGGA GCGCTGGTTC GCCACGATCC AGACCGCCGA TGACGCCCCC
TCCAAGCCCG ATCCGGCGAT GCTGCTTCAG GCCATGGCCG AGACCGGCGC CGAACCCTCG
ATGACCGTGA TGATCGGCGA CACGACCTTC GACATGATGA TGGCCCGGAG CGCGAGCGTT
GCCGCCATCG GTGTCGGCTG GGGCTACCAC ACCCCCGGCG CCCTGTTCAG CGCGGGTGCG
GTCACGGTCG TCGATTCGGC GGCGACCTTG AGCGACCTGT TCTCCGGCCC CCTGGACGAT
TCGAAGCCGG GCCCGGTGAC GGAACGGCTC GCGACGCAAT AG
 
Protein sequence
MLKLIVFDVD GTLIDSQHLI VEAQHRAFSE HGLAAPPRKE ALSVVGLSLP EAFRRLVGEA 
GPIESLAHSY RKAFQALRVD PDYEEPLFPG MAELVERLHR RDDIQLGIAT GKSRRGVNHL
VDKYGWERWF ATIQTADDAP SKPDPAMLLQ AMAETGAEPS MTVMIGDTTF DMMMARSASV
AAIGVGWGYH TPGALFSAGA VTVVDSAATL SDLFSGPLDD SKPGPVTERL ATQ