Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0280 |
Symbol | |
ID | 5832597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 315058 |
End bp | 315759 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641366064 |
Product | HAD family hydrolase |
Protein accession | YP_001637775 |
Protein GI | 163849732 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCAAGC TGATCGTCTT CGACGTCGAT GGCACCCTCA TCGACAGCCA GCACCTGATC GTGGAGGCGC AGCACCGCGC CTTCTCCGAG CATGGCTTGG CAGCGCCGCC GCGCAAGGAG GCGCTGTCCG TGGTCGGGCT GTCCCTGCCG GAAGCATTCC GTCGCCTCGT CGGCGAGGCC GGGCCGATCG AATCGCTCGC GCATAGCTAT CGCAAGGCAT TCCAGGCGTT GCGGGTCGAT CCCGATTATG AAGAGCCGCT GTTCCCAGGC ATGGCCGAGT TGGTCGAGCG GCTGCACCGC CGCGACGACA TCCAGCTCGG CATCGCCACC GGCAAGTCGC GCCGGGGCGT CAATCATCTC GTGGACAAGT ACGGCTGGGA GCGCTGGTTC GCCACGATCC AGACCGCCGA TGACGCCCCC TCCAAGCCCG ATCCGGCGAT GCTGCTTCAG GCCATGGCCG AGACCGGCGC CGAACCCTCG ATGACCGTGA TGATCGGCGA CACGACCTTC GACATGATGA TGGCCCGGAG CGCGAGCGTT GCCGCCATCG GTGTCGGCTG GGGCTACCAC ACCCCCGGCG CCCTGTTCAG CGCGGGTGCG GTCACGGTCG TCGATTCGGC GGCGACCTTG AGCGACCTGT TCTCCGGCCC CCTGGACGAT TCGAAGCCGG GCCCGGTGAC GGAACGGCTC GCGACGCAAT AG
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Protein sequence | MLKLIVFDVD GTLIDSQHLI VEAQHRAFSE HGLAAPPRKE ALSVVGLSLP EAFRRLVGEA GPIESLAHSY RKAFQALRVD PDYEEPLFPG MAELVERLHR RDDIQLGIAT GKSRRGVNHL VDKYGWERWF ATIQTADDAP SKPDPAMLLQ AMAETGAEPS MTVMIGDTTF DMMMARSASV AAIGVGWGYH TPGALFSAGA VTVVDSAATL SDLFSGPLDD SKPGPVTERL ATQ
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