Gene Mext_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0278 
Symbol 
ID5833049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp313007 
End bp314413 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content71% 
IMG OID641366062 
ProductRluA family pseudouridine synthase 
Protein accessionYP_001637773 
Protein GI163849730 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAC GTCCACCACA TCGCGGGTCC GGCGCAAAAC GCGGACCCAG CGGGTTCGCG 
CCGCGTGCCG GCACGGGGCC GCGCACCTCC GCCAAAGACG CAGCGCAGCG CGCCGCCCGC
AACCGCGGCG AGGACGCCGC CGAGCGCTCG CCCTGGGATG ACGGCGCGGC CAGCGAGAGC
GCACCGCGCC CGAATCGCGT GCCCGAAGCC GCCGCATCGA AGCCGGACGC GCCGCGCGCT
CGCGCCAAAT CGCCTTCTGA CAAGCCGCAC GCTGCCAAGC CGTCATTCGC CAAGCCCTCC
TTTGCCAAGT CCTCCTTGGC CAAGCCTGAC CCGGCCAAGG CACCGCCCGC GGAGGCTCCG
GCCGGCCCGA CGCGCCGCGA ACAGCGGGCT GCGGCCTCGG CGACGCTGGC AAGTGGCGTG
CAGACGCTGA CCGTCGACCC CGACGAGGCC GGGATGCGCA TCGACCGCTT TCTGGGCGCG
CGCTTTCCGC AGCTTCCCTT CACTCGCGTG CAGAGCATCG TCCGCAAGGG CGAGCTGCGG
GTCGATGGCA AGCGCGCCAA GCCGAACGAC CGGCTGGAGC CGGGTTCGAG CGTGCGGGTG
CCGCCGCTCA AGCTCGACCA GCCGACCGAG AGGCCGCGCA GCGCCGCCAA GATCGATGGG
GACGCCGAGT TCCTGCGTTC GCTGATCCTC TACGAGGATG CGGACATGAT GATCCTCAAC
AAGCCGTTCG GCCTCGCGGT GCAGGGCGGC TCGGGCACGG TGCGCCACGT CGACGGCCTG
TTGGAGGCGT TGACCGGGCC GGATGGACAG CGCCCGCGCC TCGTCCACCG CCTCGACAAG
GACACGGCTG GCTGCCTGAT CGTTGCCAAG ACGCGTCTGG CCGCGTCGAC GCTGGCCAAG
AGCTTCCGCT CGCGCGCCGC GCGCAAGATC TACTGGGCGC TGGTGGCCGG CGTGCCCCGC
ACCCGCCAGG GCCGGGTCTC GACCTACCTC GTCAAGGACG AGCCGACCGA CGCCGATGCG
CGCATGCGCG TCGCCAAACA CGGCGACGAC GGCGCCAGCC ACGCGCTCAC CTACTACGCC
ACGGTCGATC AGGCGGCGCA GAAGCTGGCC TGGCTCTCGC TGAAACCCGT CACCGGGCGG
ACGCACCAGT TGCGGGCCCA CGCTGCGCAT ATCGGCCACC CGATCGTCGG CGACCCGAAA
TATTTCGACG TGGAGAACTG GGAGCTGCCC GGCGGCATCC AGAATCGCCT GCACCTGCTC
GCCCGCCGCA TCGTGATCCC GCATCCGCGC ACCGGCCAGC CGGTCGATGT CAGCGCCCCG
CTGCCGCCGC ACATGGCGCA GAGCTGGAAC CTGCTCGGTT TCGATGCCGC CCGCTACGAC
CCGATCGTCG AAGCGCCGGA AGCCTGA
 
Protein sequence
MKGRPPHRGS GAKRGPSGFA PRAGTGPRTS AKDAAQRAAR NRGEDAAERS PWDDGAASES 
APRPNRVPEA AASKPDAPRA RAKSPSDKPH AAKPSFAKPS FAKSSLAKPD PAKAPPAEAP
AGPTRREQRA AASATLASGV QTLTVDPDEA GMRIDRFLGA RFPQLPFTRV QSIVRKGELR
VDGKRAKPND RLEPGSSVRV PPLKLDQPTE RPRSAAKIDG DAEFLRSLIL YEDADMMILN
KPFGLAVQGG SGTVRHVDGL LEALTGPDGQ RPRLVHRLDK DTAGCLIVAK TRLAASTLAK
SFRSRAARKI YWALVAGVPR TRQGRVSTYL VKDEPTDADA RMRVAKHGDD GASHALTYYA
TVDQAAQKLA WLSLKPVTGR THQLRAHAAH IGHPIVGDPK YFDVENWELP GGIQNRLHLL
ARRIVIPHPR TGQPVDVSAP LPPHMAQSWN LLGFDAARYD PIVEAPEA