| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0180 |
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| Symbol | |
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| ID | 5832673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 193081 |
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| End bp | 194046 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641365964 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001637677 |
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| Protein GI | 163849634 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.589969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAG ACGCCGAGTT TCTCATCGAC CGCCGCCGTC TGCGCCGCAA GCTCACGCTG
TGGCGGATGC TCGGCATCGG TGCGGCCATC GTCGCCGTCG GTGCCTTGGG CTACCGCGCG
CGGGTCGGCG AGGGCCGGCT GTTCCCGGCC ACCGAGAATC AGATCGCCCG GATCTCGATC
GGCGGCTTCA TCGCCGGCAG CGACTCGACC CGCAAACTGA TCGAGCGCGT CGGCGAGTCG
AACGCGGTCA AGGGTGTGGT GATCTCGATC TCGTCGCCCG GCGGTACGAC GACCGGCTCG
GAGGAGCTCT ACCGCAACCT GCGCGCGCTG GCGGCGAAGA AGCCGATGGT CGCCTTCGTC
GATGGCACGG CTGCCTCGGG CGCCTACATC ACCGCGATCG CCGCCGATCA CATCGTCGCC
CGCGAGACCG CGCTTGTCGG CTCGATCGGC GTGCTGTTCC AGTATCCGGA CGTGTCCGGC
CTGCTCGACA AGGTCGGCGT GAAGGTCGAG TCCGTCAAAT CTTCGCCGCT CAAGGCGGAG
CCCTCGGGCT TCAGCCCGAC TTCGCCGGAA GCCCGCGCGG CGCTGTCGTC GATCGTTCTC
GACACCTATG GCTGGTTCAA GGGCCTGGTG GCGGAGCGCC GCGGCATGGA TGAGAGCCAG
ATTGCCGCCG TCGCCGATGG CCGCGTGTTC AGCGGCCGCC AGAGCCTGCC CCTCAAGCTC
GTCGATGAAC TCGGTGGCGA GCGCCAAGCG GTGGCGTGGC TGGAGAAGGA GAAGAAGGTC
CCCGAGAAGC TTCCGGTGAA GGACTGGAAG CCGAAAGCCG ACGGCGGGTT CAAGCTCTGG
TCGACTCTGG GGCTCGGCGC CGATCTTCTC GGCCTCGATG GGCTTGCCAG CCGTCTCCGT
GCCGTCGAGG ACGAAGCCGC CGGGCTCAGC GGCGGGCTCC TGGCCGTCTG GCGGCCGGCT
CCCTGA
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| Protein sequence | MAADAEFLID RRRLRRKLTL WRMLGIGAAI VAVGALGYRA RVGEGRLFPA TENQIARISI
GGFIAGSDST RKLIERVGES NAVKGVVISI SSPGGTTTGS EELYRNLRAL AAKKPMVAFV
DGTAASGAYI TAIAADHIVA RETALVGSIG VLFQYPDVSG LLDKVGVKVE SVKSSPLKAE
PSGFSPTSPE ARAALSSIVL DTYGWFKGLV AERRGMDESQ IAAVADGRVF SGRQSLPLKL
VDELGGERQA VAWLEKEKKV PEKLPVKDWK PKADGGFKLW STLGLGADLL GLDGLASRLR
AVEDEAAGLS GGLLAVWRPA P
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