Gene Mext_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0123 
Symbol 
ID5834190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp130415 
End bp132493 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content63% 
IMG OID641365908 
ProductPAS sensor protein 
Protein accessionYP_001637622 
Protein GI163849579 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACG CAATGGGCCG GGAGGCAGCC TTCCTAACTG GCGGTGAGAT GGGCGCGCGG 
ATGCGGGCTC ATGATTGGTC TCGTTCGCCA ATAGGTCCTC TCGAAGCTTG GCCCGCGCCG
TTGCGTATGG CGGCAAGCCT CATGCTGAAT TCTGCCTTTC CAATGTTTAT CGCGTGGGGC
CGGGAACTCG GATTTATTTA TAATGACGCC TACGCGGAAA TCCTTGGCAA CAAACACCCG
GCAGCGCTTG GCTGTCCATT TGAAGTAATC TGGTCTGAGA TCTGGCCTGA CATCAATCCG
CTAATCCAGC GTGCTATGGC CGGTGAGGCG ACGTTCTCAG CAGATCTACC TTTGCGCATG
ATGCGGCGGG GACAATACGA AGACACGTGG TTCACGTTCT CGTACTCACC AGTGCGCGAG
GAAGATGGCC GCGTAGCAGG CATGTTCTGC TGCTGTGTGG AAACGACAGC AGGAGTTCGG
TCACAAGCCG AACTCGCTGA GCTGAACATC GACCTTGAAC GGCAGGTGAC TGAACGATCC
CGTGAGCGGG ATCGGCTCTG GCGTAACACC CAAGACATTC AGGTCATCAT TGACGGTGCG
GGCGTCTTTC ACGCCGTCAA TCCAGCTTTC ACGGCAATCC TCGGCTGGAC ACCTGAAGAT
GTGATTGGCA GGCCGGTGTT CGACTTTGTA CTTCCAGATG ATGAGGCGTT GACCAGCCGC
GCGCTAGAGC ATGCGCGCGT CGAGAGCCTG CCGGTCGTTG AGAACCGCTA CCGCCACAAG
AACGGGGGTT TCCGCTGGAT CTCGTGGGTC GCTGCTCCTG AGGCGAAGCT GATCTACGCG
AGTGGACGGC ACATCACGGC GGAGAAGGAG CAGGCCGAGG CTCTGAGCAG GACCGAGGAG
GCCCTTCGCC AAGCGCAGAA GATGGAGGCT GTTGGGCAAC TCACCGGAGG GCTGGCGCAC
GACTTCAACA ACCTGCTGGC GGGCATCTCC GGCTCACTGG AACTGATGCA GACCCGCATG
CAACAGGGCC GCCTCACGGA TGTGGACCGC TACATGACGG CCGCGCAGGG GGCAGCAAAG
CGCGCCGCTG CGCTAACCCA TCGGCTGCTC GCGTTCTCCC GTCGCCAGAC CCTCGACCCG
AAGCCCACCG ATGTCAGCCG GCTTGCCATG GGCATGCACG AGCTGATCCA GCGTACGGTC
GGACCCGGCA TCCTAGTCGA GGTCGTGGGC GCGACCGGTG CTTGGCCGGC CTTGGTGGAC
CCGCCGCAGC TTGAGAACGC CCTTCTGAAC CTCTGCATCA ACGCCCGCGA CGCGATGCCG
GATGGCGGCA TCATCACCAT CGAGACCGCG AATAAGTGGA TGGACGAACG CGCAGCCCGC
CAGCACGATA TGCCGGAAGG CCAGTACCTC AGCCTCGCCG TGACCGATAC CGGGACCGGC
ATGCCGCCGG AGGTCGTCGC CAGGGCATTC GACCCGTTCT TCACAACGAA GCCTATCGGT
GAGGGCACGG GGCTGGGCCT GTCGATGATC TACGGGTTCG CGCAGCAGTC AGGCGGGCAG
GTCCGCATCT ACTCGGAAGT CGGGCAGGGC ACCACCGTAT GCATCTACCT GCCGCGCTTC
TACGGGGTTG TTGAAGATGA CACCGCAGGC GAGCAGATTG CCGAACTACC ACGCTCGGAG
GCTGGCGAGA CGGTCCTGGT TGTGGACGAC GAGCCAACCG TGCGCATGCT GATCACCGAC
ATCCTCGAAG ACCTTGGCTA TGCGGCCATT GAGGCGGGTG ACAGCGCGAC CGGCCTCAAG
GTGCTGCAAT CGGACGTACG CATTGACCTG CTGGTGACGG ACGTAGGCCT GCCCGGCGGC
ATGAACGGGC GACAGATGGC GGACGCGGCG CGGAACCATC GACCCGACCT GAAGGTGCTG
TTCATCACCG GCTACGCGGA GAACGCGATC CTCGGCAACG GGATGCTTCC ACCGGGGATG
GCAGTGCTGA CCAAGCCGTT CGCGATGGAC AACATGGCCG CGCGCATCCG CTCGATGATC
GAGGCGGGGC GGGAGACGAG GCTGCAACGT CGAAGCTGA
 
Protein sequence
MADAMGREAA FLTGGEMGAR MRAHDWSRSP IGPLEAWPAP LRMAASLMLN SAFPMFIAWG 
RELGFIYNDA YAEILGNKHP AALGCPFEVI WSEIWPDINP LIQRAMAGEA TFSADLPLRM
MRRGQYEDTW FTFSYSPVRE EDGRVAGMFC CCVETTAGVR SQAELAELNI DLERQVTERS
RERDRLWRNT QDIQVIIDGA GVFHAVNPAF TAILGWTPED VIGRPVFDFV LPDDEALTSR
ALEHARVESL PVVENRYRHK NGGFRWISWV AAPEAKLIYA SGRHITAEKE QAEALSRTEE
ALRQAQKMEA VGQLTGGLAH DFNNLLAGIS GSLELMQTRM QQGRLTDVDR YMTAAQGAAK
RAAALTHRLL AFSRRQTLDP KPTDVSRLAM GMHELIQRTV GPGILVEVVG ATGAWPALVD
PPQLENALLN LCINARDAMP DGGIITIETA NKWMDERAAR QHDMPEGQYL SLAVTDTGTG
MPPEVVARAF DPFFTTKPIG EGTGLGLSMI YGFAQQSGGQ VRIYSEVGQG TTVCIYLPRF
YGVVEDDTAG EQIAELPRSE AGETVLVVDD EPTVRMLITD ILEDLGYAAI EAGDSATGLK
VLQSDVRIDL LVTDVGLPGG MNGRQMADAA RNHRPDLKVL FITGYAENAI LGNGMLPPGM
AVLTKPFAMD NMAARIRSMI EAGRETRLQR RS