Gene Mext_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0111 
Symbol 
ID5832275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp118719 
End bp119402 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID641365896 
Productnuclease 
Protein accessionYP_001637610 
Protein GI163849567 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCCC GGTCCTGGCT CCTTGTCCTG CTTCTCGCCA CGCCAGCCCA CGCTGAGCCG 
TTCGTCGGCC GAGCCTCAAT TGTCGATGGC GACACGCTCG ACGTTCGTGG AACGCGCATC
CGCCTTCACG GCATCGACGC GCCGGAAAGC GCCCAGCTCT GCAAGGACGC CGGTGGCAAG
GACTATCGCT GCGGACAGGC AGCTGCTCTG GCTCTCGCCG ATCACATCGG CAAACGCCTC
GTGACATGTG ATCCGCGCGA GACCGACCGC TACGGCCGAG TCGTCGCCGT CTGCCGGGCT
GACGCGGAGG ACCTGAACGC CTGGATGGTC GGACAAGGCC ACGCCATTGC GTACCGGCGC
TACACCGAGG ACTACGTCAA CACTGAACTC ACTGCGAAGG CGCTCCGGCA CGGCATCTGG
GCGGGCACGT TCCAGGATCC ATCCGAGTGG CGACGCGCGA AGCGTGCCGG CGGGGAACGC
TCGAGGCCTG AGACCGTCAC GCCACCGAAC AAGGCGAGTG GCTGCAACAT CAAGGGCAAC
ATCTCAGCCG GCGGAGAGCG GATCTATCAC CTGCCCGGCT CGCGCGACTA CGAGCGCACC
CGCATCAACG ACCGCGCTGG CGAGCGCCTG TTCTGCTCGG AGGACGAGGC CAAGGTGGCC
GGCTGGCGGG CGACGCGAGG CTGA
 
Protein sequence
MRSRSWLLVL LLATPAHAEP FVGRASIVDG DTLDVRGTRI RLHGIDAPES AQLCKDAGGK 
DYRCGQAAAL ALADHIGKRL VTCDPRETDR YGRVVAVCRA DAEDLNAWMV GQGHAIAYRR
YTEDYVNTEL TAKALRHGIW AGTFQDPSEW RRAKRAGGER SRPETVTPPN KASGCNIKGN
ISAGGERIYH LPGSRDYERT RINDRAGERL FCSEDEAKVA GWRATRG